Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0443 ATGGCTTTTTGCTCACTATCTTTCTGTGCAAAGGGTTTGGATCGAAGAGCAAGAAGGAAGAAAGTACCAAAATGGAGGGTATTCTCTTTGAAAGAATTAGTCTCAGCTACAAATAATTTTAACTTTGATAACAAGCTTGAAGAAGCTGAATTTTGCTGTGTCTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCGGTTAAGAGACTGAAAGTTGGGAGCAACAAGGCAGAATCAGAATTTGCTGTTGAAGTTGAAATATTGGCAAGAGCACAACACAAGAATCTTGTTAGGCTACGTGGATATTGTGCTGAGGGGCAAGAAAGGCTAATTGTATTTGACTATATGCCTAATTTGAGCCTCTTCTCTCATCTGCATGGACAACACCCTGAAGAATACCTTCTTGATTGGAACAAACGAATGAATATCGCAATTGGGTCATCCGAGGGCATTGCATATCTTCACCACCAAGCAACACCACGAGTAATCCTTAGAGACATCAAAGCAAGCAATGTGCTACTGGATGCAGATTTCCAGGCTCGGATTGCGGGTTTTGAATTTGCTAAGTTGATCCCTGATGGGGCAACCCATATAAGCACCACGATTAAGGGAACACTAGGCTACCTGGCGCCGGAATATGCCTTGCTTGGTAAGGCATCCGAGAGTTGTGATGTCTATAGCTTTGGGATTCTCTTGCTGGAACTCGTTAGTGGTAAGAGACCAATTGTAAAACTGAGTGCCACAACGAAGCAATCGATATTTGATTGGGCACTTCCTTTGGCTTGTGATAAGAAATATAGTGAACTTGCAGATTCAAAGCTAAAGGGAAATTTTGTGGAGGAAGAACTTAAAAGAGTGATTCTTGTTGGACTTGTATGTGCTCAAATTCAGCATGAGAAGAGACCCACCATGTTTGAAGTGGTAGAGCTGCTTAAGGGAGAATCTAAGAACAAGTTATCTCAATTAGAAAACAATGAATTGTTCAGAAATCCTCCAGCTTTAGAAAACAAAGATGGCGCATTAGTTGCAGACAACAGTTCTGACTTTGTCTCAGGAGAAGGAAATATTTTAAATGAAACAGAATAG 1086 0.4116 MAFCSLSFCAKGLDRRARRKKVPKWRVFSLKELVSATNNFNFDNKLEEAEFCCVYWGQLWDGSQIAVKRLKVGSNKAESEFAVEVEILARAQHKNLVRLRGYCAEGQERLIVFDYMPNLSLFSHLHGQHPEEYLLDWNKRMNIAIGSSEGIAYLHHQATPRVILRDIKASNVLLDADFQARIAGFEFAKLIPDGATHISTTIKGTLGYLAPEYALLGKASESCDVYSFGILLLELVSGKRPIVKLSATTKQSIFDWALPLACDKKYSELADSKLKGNFVEEELKRVILVGLVCAQIQHEKRPTMFEVVELLKGESKNKLSQLENNELFRNPPALENKDGALVADNSSDFVSGEGNILNETE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0443 361 Pfam Protein kinase domain 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0443 361 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Lele40g0443 361 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0443 361 CDD STKc_IRAK 51 313 - -
Lele40g0443 361 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Lele40g0443 361 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Lele40g0443 361 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Lele40g0443 361 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Lele40g0443 361 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0443 361 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0443 Lele-ChrLele40 3661361 3664197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0443 28 314 Trihelix Transcription Factor Family AT1G70460 44.674 9.51e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele40g0443 Pkinase 6e-36 CL0016