Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0438 ATGAGATTATGCACAAGTGGAACCTTGTTTATCTATGTGTTTTTTCTGCTAAGAGTGTGTCTTGCCGACCATCAACAACACATAAGCCAGATTTATCCCAGATTCGAAGCATCTCAGCTGGATTGGAATGAGCATGGTGGACTGTTCTTACTATCAAACAACTCGGCTTTTGCCTTTGGATTCTTCGGTACGCTCGATGTTTCCTTATTTGTTCTAGTTGTCATTCACTTGAGAAGCTATAAAGTTGTTTGGACTGCTAACAGAGGCTTCCTGGTAAGAAACTCTGATAAATTTGTGTTTGACAAAACTGGGAATGCATATTTAGAAAGAGGAGAAGGTCTGGTTTGGGAAACAAAGACGAAAGGACGAAAAGTTAGATCCATGGAACTGAAGGATTCAGGGAATTTGGTGTTAATTGGTGAAGAAGGAAGAGTTATTTGGGAGAGTTTTAGTCATCCTACTGATACCCTTTTGCCTGATCAAGTTTTTGTTGAAGGAATGAGTCTCAAAAGCTTCCCTAACCGAAATAACTTATTTAGTTATCTTACTTTTTTGTCTGGCGATTTGGTTTTGTATGCTGGATATGAACCTCCTCAGATATATTGGTCCCTATTAAGTGAAAGCAATGTAAGTAATAATAAGGGGGTTCATTTTCATTCTGCTTCTTTGGTTTCGAATTCTTGGAATTTCTACGACAAAAGTGGAGCTTTGAAATGGAAATCTGTTTTCTCTGATAAATCTGATCCTAAGGCAATGTTTGCTGCTATATTGGATCCTAATGGTGCTATCTCTTTTTATGATCTTAACAAGGGAAAATCTGTTACACCTGAAGCAACTAGGATACCTGAAGATCCTTGTGAAATTGCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAGAACTGGTGTGAATGTCCTTCACTTCTCAAATCTCGTTTCAATTGCAAGCCTCCGAACGCGAACACTTCCACCTCATCATCGTGTTCTTCTTCTAGAACCCGACAAGACCTCGTGTATGTCGGGGAAAAACTCGATTACTTCGCCCTCAAGTATGTTCAGCCGGTTTCTAAATCGTCGTCCCTGAGCGCTTGTAAAGAAGGCTGCTTAAGAAACTGCTCTTGCCTCGTGCTTTTCTTCGAAAACAGTACAGGAAAGTGCTTCCATTTTGATCAGACAGGGAGTTTCCAACGCTCTAAGTCAAGTTCTGGAGGCTATGTTTCATTCATGAAGATCTCTATTGAAGAAGATGGAGATGGAAGAAAAGGAAGGAATCCGAATCCGACTGTACTAGTCGTCGTTGTTGTTATTTTCACAATTCTGATTATTATTGGACTTGTGTTATGGTTCTGGCATTGCTACAAAAATAAGCATCTCTTTGAGGATTCTCCAGAAACATTGGAGGAAGATGATTTCTTGGACAATCTTCAAGGTATGCCGACTCGTTTTAGTTATAGTACTCTAAGTAAAGCTACTACGAATTTCTCTACAAAAATTGGTGAAGGAGGGTTTGGTTCAGTTTATCTAGGAGTTCTTGAAGATGGATCACAATTAGCTGTGAAGAAACTTGAAGGATTAGGGCAAGGGGCAAAAGAGTTCAAAGCTGAAGTTTCCAGCATTGGAAGTATTCACCATGTTCATCTGGTGAAGCTGAAGGGCTTCTGTGCCGAAGGCCCTCATCGCCTTCTGGTGTACGAATACATGGCAAGAGGCTCACTGAACAAATGGATCTTTAAAAGCCATGAAAATGCTTTCTTGCTGAATTGGGAAACCAGATTCAACATTGCATTAGGTACAGCAAGAGGATTAGCCTATCTTCATGAAGAGTGCGAGGTGAAAATCATACACTGTGATATCAAACCGGAAAATGTCCTTCTTGATGAAAACTTCACGGCTAAAGTTTCAGATTTCGGTTTGGCGAAGCTCATGAGCCGCGAACAGAGCAATGTCTTCACAACACTAAGAGGAACAAGAGGGTATCTAGCACCAGAATGGATCACAAACTATGCAATTTCTGAGAAGAGTGATGTTTACAGCTATGGGATGGTTCTGCTTGAAATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCGGAGAAAGCGCATTTTCCTTCGTACGCGTTCAGGATGATGGAAGAAGGAAAACTGAAGCAAGTTCTTGATCCAATGATAGACATTGAAGAGAATGATGAAAGAGCTTTCACTGCAGCGAAGGTTTCTCTGTGGTGTATACAAGATGACATGAGTTTAAGGCCTTCAATGACTAAGGTTGTTCAAATGCTTGAAGGTGTTATCCCTGTCACTGAGCCACCATCATTATCTTCTTCAAGTTCTTATTCATCATTCCTAAAAATGGGTAGTGAACAAGCTTCTTCATCCACACAGGCTTCTTTTTACAGCAATGTGCCCCTATCTTGTGTTCAGTTATCAGGACCTAGATGA 2448 0.4048 MRLCTSGTLFIYVFFLLRVCLADHQQHISQIYPRFEASQLDWNEHGGLFLLSNNSAFAFGFFGTLDVSLFVLVVIHLRSYKVVWTANRGFLVRNSDKFVFDKTGNAYLERGEGLVWETKTKGRKVRSMELKDSGNLVLIGEEGRVIWESFSHPTDTLLPDQVFVEGMSLKSFPNRNNLFSYLTFLSGDLVLYAGYEPPQIYWSLLSESNVSNNKGVHFHSASLVSNSWNFYDKSGALKWKSVFSDKSDPKAMFAAILDPNGAISFYDLNKGKSVTPEATRIPEDPCEIAEPCDPYYVCFFENWCECPSLLKSRFNCKPPNANTSTSSSCSSSRTRQDLVYVGEKLDYFALKYVQPVSKSSSLSACKEGCLRNCSCLVLFFENSTGKCFHFDQTGSFQRSKSSSGGYVSFMKISIEEDGDGRKGRNPNPTVLVVVVVIFTILIIIGLVLWFWHCYKNKHLFEDSPETLEEDDFLDNLQGMPTRFSYSTLSKATTNFSTKIGEGGFGSVYLGVLEDGSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLNKWIFKSHENAFLLNWETRFNIALGTARGLAYLHEECEVKIIHCDIKPENVLLDENFTAKVSDFGLAKLMSREQSNVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMEEGKLKQVLDPMIDIEENDERAFTAAKVSLWCIQDDMSLRPSMTKVVQMLEGVIPVTEPPSLSSSSSYSSFLKMGSEQASSSTQASFYSNVPLSCVQLSGPR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0438 815 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Lele40g0438 815 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 775 - -
Lele40g0438 815 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0438 815 PIRSF SRK 4 812 IPR024171 GO:0004674
Lele40g0438 815 Pfam D-mannose binding lectin 82 161 IPR001480 -
Lele40g0438 815 SMART serkin_6 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0438 815 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0438 815 Gene3D Phosphorylase Kinase; domain 1 463 567 - -
Lele40g0438 815 SMART blect_4 38 153 IPR001480 -
Lele40g0438 815 CDD B_lectin 46 153 IPR001480 -
Lele40g0438 815 FunFam S-receptor-like kinase 5 568 772 - -
Lele40g0438 815 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Lele40g0438 815 CDD STKc_IRAK 499 765 - -
Lele40g0438 815 Gene3D Transferase(Phosphotransferase) domain 1 568 772 - -
Lele40g0438 815 SUPERFAMILY Protein kinase-like (PK-like) 477 764 IPR011009 -
Lele40g0438 815 Gene3D - 43 152 IPR036426 -
Lele40g0438 815 CDD PAN_AP_plant 356 413 - -
Lele40g0438 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 203 IPR036426 -
Lele40g0438 815 FunFam serine/threonine-protein kinase PBS1-like 462 567 - -
Lele40g0438 815 Pfam PAN-like domain 354 409 IPR006583 -
Lele40g0438 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lele40g0438 815 ProSiteProfiles PAN/Apple domain profile. 329 413 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0438 Lele-ChrLele40 3606522 3608969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0438 469 773 Receptor kinase-like Gene Family AT5G20050 48.447 6.09e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele40g0438 Pkinase 1.9e-50 CL0016