Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0422 ATGGCATCACCTTTGTTCTATGGGATTCATATGAATATGGTGCGCCCTGCTGCAACAGAAAGATGCAGGAAGAAGGGTTGGATGTCCAAACAAGTAGAAATGCGGAACACCATGGTGCACTTATCCACCATCTTTCTTTATTACAATCGAGGAGAGACAATACAGAGTTTGTTATGGAAAATTGGACATGTACTTCCTCAAGAAATTGAGGAGAAACTTTGTCATACGGAGGTAGAGTATTTTAAGAAGAACTCTACGGCTTTGAAATCATATATGTCAAAAGTGCAACTTGATCTGACTGTGTTCTTTGCTCATGGTCAGCCTGAATACATATTTAAAAATGGTATTGCAGCATTGCACATTGATATGGTGCCGCCCAAAGATCCCTACATCCAAGTGAGAGTCCTCTATGATATTGGTGATGGGATTGTGCTTAGCGATGACAAGACTGCCAATTTTGCGTGCCATTCAATGCATTTTCTGAAGCGAACTGACGCTGAGCAATTCATCTCACGGGTTAGTAGGGTTAATGGAGGAGCTCACAGGCTGACATGA 555 0.4198 MASPLFYGIHMNMVRPAATERCRKKGWMSKQVEMRNTMVHLSTIFLYYNRGETIQSLLWKIGHVLPQEIEEKLCHTEVEYFKKNSTALKSYMSKVQLDLTVFFAHGQPEYIFKNGIAALHIDMVPPKDPYIQVRVLYDIGDGIVLSDDKTANFACHSMHFLKRTDAEQFISRVSRVNGGAHRLT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0422 184 PANTHER PARTNER OF SLD5 119 173 IPR005339 GO:0000811|GO:0006260
Lele40g0422 184 SUPERFAMILY GINS helical bundle-like 47 101 IPR036224 -
Lele40g0422 184 Gene3D - 19 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0422 Lele-ChrLele40 3471771 3473217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0422 48 172 Core DNA Replication Machinery Family AT1G80190 54.688 5.84e-38 127