Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0418 ATGTGTGATTTGAGAGATCATAGCCATATTAAGAGGCCACACAGAGCGAACCAACCTGCTTGGCAAGCAATAAAGCAGCTCTGCTCCGAGTACGGTGAAGTTAGGCTCGACCACTTTCACCTCATTCGCCGGCTTGGCTCCGGCGGTGTTGGGAACGTGTTCCTCTGTGAGATCAAGCACACAACGATGACGAAAGGTGGTGGTGGTGGTTGTTACTTTGCATTGAAAGTTGTTGATAGAGAGTGTCTGAGAAAGAAAAATAAGCTCAAGAGAGCTGAGGTTGAGAGACAGGTTTTGAGTGTTCTTGATCATCCTTTTCTTCCTACCCTATATGCTAGCTTCGATTCTTATCACTACTCTTGTTTGCTCATTGATTACTGCCATGGCGGTGACTTGTTTCGGCTTCAACAAAAACAGCCAACTCTTCGTTTTAGCGTCTCAGCTGCTAAATTCTATGCGGCTGAAGTGCTTCTAGCTCTTGAATATCTGCACATGATGGGGATAATTTACAGAGACCTAAAGCCAGAGAATGTTCTTATTCAAGAAGATGGCCACATCATGCTCTCCGACTTCGATCTCTCACTTCTTCACTGCGAGGCTCATCCCAAGCTTCTGAAACACGACATTACTGCAACAACGAACAAGAAGAAGAAGCATACAACTTTCTGTTGTACTGAAAACTCAGTGGAGGATGGTGTCATAATCAGAAGGAGGAGGAAGAAGAAGAAGAAAAAGAAAGCATCCTCCATAGCTGATGATGACGTGGAACTATCGGCAGAACCAATGAACGCAAGATCCAACTCATTTGTTGGGACCCACGAGTATTTAGCACCAGAGATGATATTAGGGTTAGGACACGGGAGTGGAGTGGATTGGTGGGCGTATGGGGTGTTTGTGTACGAGCTGCTGTATGGGATCACACCTTTCAAAGACAAAGACAACGAGAAGACAATGAGGAACATTATAGGGAAGTCGTCGGTGAGGTTTCCGACAACCGAGTTCAGATACAAAGAAGATGACGATGTTGAGGAAGAAGAGATGGAGAAGGCACAAGATCTCATAAAACAGCTTCTGGAGAAGAATCCTAAGAAGAGACTTGGATCTACGAGAGGATCTTGTGAGATTAAGAGACATGAATTCTTCGAAGGCACGAACTGGGCCTTAATTAGATCGAATAAACCACCCGCTGTCCCTAAACAAGATGTATCAGTATTAGCAGACTTGGTCAAGGACAAAGCTACAGTGCAGAACCCTCAGAAAATTTATTTCTTCTGA 1275 0.4463 MCDLRDHSHIKRPHRANQPAWQAIKQLCSEYGEVRLDHFHLIRRLGSGGVGNVFLCEIKHTTMTKGGGGGCYFALKVVDRECLRKKNKLKRAEVERQVLSVLDHPFLPTLYASFDSYHYSCLLIDYCHGGDLFRLQQKQPTLRFSVSAAKFYAAEVLLALEYLHMMGIIYRDLKPENVLIQEDGHIMLSDFDLSLLHCEAHPKLLKHDITATTNKKKKHTTFCCTENSVEDGVIIRRRRKKKKKKKASSIADDDVELSAEPMNARSNSFVGTHEYLAPEMILGLGHGSGVDWWAYGVFVYELLYGITPFKDKDNEKTMRNIIGKSSVRFPTTEFRYKEDDDVEEEEMEKAQDLIKQLLEKNPKKRLGSTRGSCEIKRHEFFEGTNWALIRSNKPPAVPKQDVSVLADLVKDKATVQNPQKIYFF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0418 424 Gene3D Transferase(Phosphotransferase) domain 1 255 399 - -
Lele40g0418 424 Gene3D Phosphorylase Kinase; domain 1 37 126 - -
Lele40g0418 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lele40g0418 424 Coils Coil 340 360 - -
Lele40g0418 424 PANTHER FLIPPASE KINASE 1-RELATED 8 404 - -
Lele40g0418 424 ProSiteProfiles Protein kinase domain profile. 39 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0418 424 SMART serkin_6 39 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0418 424 SUPERFAMILY Protein kinase-like (PK-like) 18 407 IPR011009 -
Lele40g0418 424 Coils Coil 75 95 - -
Lele40g0418 424 FunFam Serine/threonine-protein kinase OXI1 131 199 - -
Lele40g0418 424 Gene3D Transferase(Phosphotransferase) domain 1 127 226 - -
Lele40g0418 424 Pfam Protein kinase domain 39 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0418 424 Pfam Protein kinase domain 266 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0418 Lele-ChrLele40 3435888 3437645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0418 12 403 AGC Kinase Gene Family AT2G26700 48.299 5.84e-138 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele40g0418 Pkinase 1e-32 CL0016