Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0415 ATGAGCTATGCACATTCTCAAATGGGCTCTGGTAGCAGAACTGCTAGAAGAAGTTTTGAGTTTGGGAAGACGCATGTGGTGAGGCCCAAAGGAAAGCACCAAGCTACTATTGTCTGGCTGCATGGTCTTGGTGATAATGGTTTGAGGTTCCAAATTTGGGTTTTTCTTATGTTAAATGTTTTGTCTCTTCCTGCTCAGATTCTAGATGGAACAAATTCTGGGGAAGAAAGTAGTGTTATGCTGGACAACAAGACATTCAGAAAAGCTAAAATTGCTTCTTCTTCTTCTGGGTATATTGACGATTTTGTCAAGTGCTTGCTCATCTCAACTCCTGGAATCCCTTCCACTCCCAAATGGTTTGATGTTGGAGAACTCTCAGAGGAAGGTTCAGATGATTGGGAGGGCTTAGATGCCTCAGCTGCACATATTGCCAACCTGTTGTCAACCGAGCCAGCTGATGTGAAAGTTGGGATTGGAGGCTTCAGCATGGGTGCAGCAACAGCTTTGTATTCTGCTACTTGTTTTGCTATGTGTAGGTATTCAAATGGAATACCATATCCTCTTAACATTAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAAGGAGCCTAAGGAACAGGATTGAAGTGTCACATGAGGCCAGAAGGCGAGCTGCTTCATTACCCATTTTGCTGTGCCATGGAAACAATGATGATGTAGTCCTGTACAAATATGGAGAGAAATCAGCCCAATGCCTAAGTTCAGGCGGATTTCGATACATTACATTCAACTGCTATGATGGTCTTGGCCATTACACGGTTCCTAGAGAGATGGATGAAGTCTGTAATTGGCTTAACTCAAGGCTTGGGCTTGATGGAACCTCATAA 873 0.4387 MSYAHSQMGSGSRTARRSFEFGKTHVVRPKGKHQATIVWLHGLGDNGLRFQIWVFLMLNVLSLPAQILDGTNSGEESSVMLDNKTFRKAKIASSSSGYIDDFVKCLLISTPGIPSTPKWFDVGELSEEGSDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAATALYSATCFAMCRYSNGIPYPLNIRAVVGLSGWLPGSRSLRNRIEVSHEARRRAASLPILLCHGNNDDVVLYKYGEKSAQCLSSGGFRYITFNCYDGLGHYTVPREMDEVCNWLNSRLGLDGTS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0415 290 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 49 - -
Lele40g0415 290 SUPERFAMILY alpha/beta-Hydrolases 109 284 IPR029058 -
Lele40g0415 290 Pfam Phospholipase/Carboxylesterase 116 281 IPR003140 GO:0016787
Lele40g0415 290 Gene3D alpha/beta hydrolase 15 285 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0415 Lele-ChrLele40 3418491 3421283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0415 1 288 Acyl Lipid Metabolism Gene Families AT5G20060 52.083 1.28e-98 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0807 42 20968286 20981595 Lele40g0415 40 3418491 3421283 CCT
Lele40g0415 40 3418491 3421283 Lele41g0797 41 17728328 17731481 CCT
Lele40g0415 40 3418491 3421283 Lele42g0786 42 20811183 20815091 CCT
Lele40g0415 40 3418491 3421283 Lele43g0603 43 5392513 5395573 CCT
Lele40g0415 40 3418491 3421283 Lele44g0557 44 4344107 4347383 CCT
Lele39g0953 39 18377264 18380997 Lele40g0415 40 3418491 3421283 ECH
Lele40g0415 40 3418491 3421283 Lele40g0415 40 3418491 3421283 ECH
Lele37g0473 37 3908776 3911617 Lele40g0415 40 3418491 3421283 hybridization
Lele38g0441 38 3591895 3595440 Lele40g0415 40 3418491 3421283 hybridization