Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0387 ATGTTCTGTCAAATAGCGGGTGTCGGATACGACTTGGTTTTGATTGGCGGGTGGGACCCGAACTCTTGGAAGTCTTCGAATTCCGTGTATATTTACAACTTCGTGTCGGCTAAATGGCGACGTGGGGCTGACATGCCGGGTGGGCCCAGGACGTTCTTCGCCTGCGCGTCTGATTTCGAGCGAGTAGTCTACGTGGCCGGTGGGCACGACGATGAGAAGAATGCGTTGAGGTCGGTGTGGGCCTATGACGTGGCAAGAGATGAGTGGGTCGCACTTCCCGACATGGATAGAGAGAGGGACGAGTGCAAGGCCGTATTCCACCGTCAAAGCGGGAAGTTCCGGGTCGTTGGCGGTTACTGTACGCAGATGCAAGGGCGGTTTGAGAGAAGCGCCGAAGCTTTTGATGTTACCACGTGCAAGTGGGACCCGGTAGAGGATGAGTTCCTTGGATCTGCCACATGTCCGACGACCTGCGTTGACGGCGGTGATGGCGGTAGAGTTTACATGTGCTGGGATGGTGACGTGGTGGCATTGGAGAGTGACACGTGGCAAGTTGTGGCGAAACTGCCATGTGAGATCCGGGAAGTGGCGTACATGAGTTTGGGGAAGGAGGGGACGATGTTGGTGATTGGATCAAATGGGCCTGCTGAACGATACATGGGGCTTGTATTGGACCTTAAGAGTCAATGTTGGAGGAAGTTGGAAAGCCCAATAGGCCATACGGGGCACGTCCAGTTAGGTTGTCTATTGGAGATTTAG 759 0.5455 MFCQIAGVGYDLVLIGGWDPNSWKSSNSVYIYNFVSAKWRRGADMPGGPRTFFACASDFERVVYVAGGHDDEKNALRSVWAYDVARDEWVALPDMDRERDECKAVFHRQSGKFRVVGGYCTQMQGRFERSAEAFDVTTCKWDPVEDEFLGSATCPTTCVDGGDGGRVYMCWDGDVVALESDTWQVVAKLPCEIREVAYMSLGKEGTMLVIGSNGPAERYMGLVLDLKSQCWRKLESPIGHTGHVQLGCLLEI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0387 252 Pfam Kelch motif 62 95 IPR006652 GO:0005515
Lele40g0387 252 Pfam Kelch motif 6 46 IPR006652 GO:0005515
Lele40g0387 252 SMART kelc_smart 62 109 IPR006652 GO:0005515
Lele40g0387 252 SMART kelc_smart 11 59 IPR006652 GO:0005515
Lele40g0387 252 Gene3D - 1 244 IPR015915 GO:0005515
Lele40g0387 252 PANTHER OS02G0208700 PROTEIN 1 252 IPR044595 GO:0080037|GO:2000762
Lele40g0387 252 SUPERFAMILY Kelch motif 3 237 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0387 Lele-ChrLele40 3123743 3124501 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0507 44 3894414 3896126 Lele40g0387 40 3123743 3124501 CCT
Lele41g0846 41 18175023 18179842 Lele40g0387 40 3123743 3124501 CCT
Lele42g0836 42 21269331 21273794 Lele40g0387 40 3123743 3124501 CCT
Lele40g0387 40 3123743 3124501 Lele40g0387 40 3123743 3124501 ECH
Lele37g0442 37 3617104 3618189 Lele40g0387 40 3123743 3124501 hybridization
Lele38g0409 38 3279995 3281077 Lele40g0387 40 3123743 3124501 hybridization