Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0382 ATGTTCGTGATTTCCTCGGAATATTTTTCACCATTCAGTGAAATATTCAAAATAACAGAATTTGCCTATCTTGGAAGCTCCGTTCTCGTGAAAAAAATTGGAACTTTGGATTCTTTCATATCTGGGAACATGCAAGCTGCGTTGTTTAAGGATGATGCAAAGTATGTTCCTAACCCATATGATGTAAGTCATCTCCAAGGTTATGGTTATTTGAATAGTGAGAAACTTCCAGTTGGGAGTTCTCAACATTCACAGCCAGTTAGAAGTGATTATGCTGAAGATGATAATGATTATGAGGAAGAAGACAATGGAGAACAGTTAGAACAGGAGGAGGAGGAAGAAGATGATGATGATGTTGATGTTGATCAAGGTAACATTAATCAAGTTCCCCAAAAAGATGGTGATGACAACTGTGATGAAGAAGAAGATGATGAAATTGATGAGAATGGGGATGGGGATGATAGTGATGATGACACTGCTGCTGATGCTGATGAAGATGATAAGCTGAAAAGTTATACCATAAGGATTGAAGATGATTTAGAATCTCACCCAAAAAAGAGAAAGCTAAAGAGTTTGATTTCAACTTATGAATTTGCCCCCCGTGTACCTGCGCCAGCAGTTGCAGCTCCTTCAGCTCCTAAACCATCATTTGGTGGTAGAAATTCCCTTACTGACTGGACTGAGCACGAGACATTTGTTCTTCTCGATGCTTGGGGGGAGCGGTTTATTCAGCGCGGAAAGAAGAGTCTCCGGTGTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAGTTGAAAGAACAGATACTCAGTGTAGGAATAGGCTTGACACATTAAAGAAAAAGTACAAAAAGGAGAAGGCGAAATTAGCAGAAATGGGTGGTGGAACCAGCAAATGGGTTTATTTTAATAGGATCGATAAGCTGTTGTCTTCTCCTCAACAGCAAGCTGGTATATCTTGTGGTTTGGACTCGGGAGAGTATGTTTTCTCGAACCCTCGAGTTTATCTGAACCGTGCGAATGTGTTTGACAAAATGAGGGATAGTCCGGGGAATTCAGAGTCCACTGGCGACGACGATTCGGTTGGACTCCAACCAAAGAAAAGGAGGTCTAGAAGGAACAACGACGAGACTTCTTCCTTCAAATTACTCGCTGATTCCATTCAGAAGTTCAGCGAGATATACGAGAAGATTGAAAATAACAAAAGGGAACAGATGATGGAACTAGAAAAGATGAGGATGGAATTCCAAAAGGAATTGGAAATGCAGAAGAGGCAAATTTTCGAGAAAGTACAGAACGAGATCGTGAAACTGTATCAGAGAGATGAGGAGGAGAAGGACGAATCTGCTGAGAACGGTTTAAAGGACATCTGA 1383 0.4093 MFVISSEYFSPFSEIFKITEFAYLGSSVLVKKIGTLDSFISGNMQAALFKDDAKYVPNPYDVSHLQGYGYLNSEKLPVGSSQHSQPVRSDYAEDDNDYEEEDNGEQLEQEEEEEDDDDVDVDQGNINQVPQKDGDDNCDEEEDDEIDENGDGDDSDDDTAADADEDDKLKSYTIRIEDDLESHPKKRKLKSLISTYEFAPRVPAPAVAAPSAPKPSFGGRNSLTDWTEHETFVLLDAWGERFIQRGKKSLRCEEWQEVAERVKEVSKVERTDTQCRNRLDTLKKKYKKEKAKLAEMGGGTSKWVYFNRIDKLLSSPQQQAGISCGLDSGEYVFSNPRVYLNRANVFDKMRDSPGNSESTGDDDSVGLQPKKRRSRRNNDETSSFKLLADSIQKFSEIYEKIENNKREQMMELEKMRMEFQKELEMQKRQIFEKVQNEIVKLYQRDEEEKDESAENGLKDI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0382 460 Coils Coil 391 429 - -
Lele40g0382 460 MobiDBLite consensus disorder prediction 350 381 - -
Lele40g0382 460 ProSiteProfiles Myb-like domain profile. 226 283 IPR001005 -
Lele40g0382 460 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 214 447 IPR044823 -
Lele40g0382 460 MobiDBLite consensus disorder prediction 76 168 - -
Lele40g0382 460 Gene3D - 226 288 - -
Lele40g0382 460 FunFam trihelix transcription factor ASIL2 226 288 - -
Lele40g0382 460 Pfam Myb/SANT-like DNA-binding domain 225 312 IPR044822 -
Lele40g0382 460 Coils Coil 431 451 - -
Lele40g0382 460 MobiDBLite consensus disorder prediction 135 163 - -
Lele40g0382 460 MobiDBLite consensus disorder prediction 364 381 - -
Lele40g0382 460 MobiDBLite consensus disorder prediction 93 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0382 Lele-ChrLele40 3080483 3085335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0382 351 444 Trihelix Transcription Factor Family AT3G14180 38.462 3.01e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele40g0382 Myb_DNA-bind_4 9e-21 CL0123