Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0380 ATGAGCGTGGTCGGTTTTGACTTTGGTAATGAGAGCTGTATTGTTGCTGTTGCGAGGCAGAGAGGGATTGATGTCGTGCTCAATGATGAGTCCAAACGAGAAACTCCGGCAGTTGTGTGTTTTGGTGACAAACAACGGTTTATTGGAACAGCTGGGGCTGCATCTACCATGATGAACCCAAAGAATTCAATCTCACAGATCAAGCGACTAATTGGTAGACAATTCTCTGATCCTGAGTTGCAGCGGGATCTTAAGTCATTGCCTTTTATGGTAACTGAAGGGCCTGATGGCTATCCATTAATTCATGCACGGTATTTGGGTGAAAATAAAACATTTACACCAACACAAGTGTTGGGAATGGTGTTCTCAGATCTCAAAGGCATAGCTGAGAAGAATTTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCAGTTTATTTCACTGATCTTCAGAGACGTGCAGTATTGGATGCCGCTACAATTGCGGGTTTGCACCCACTTCGCCTGATTCATGAAACGACAGCAACTGCCTTGGCTTATGGAATTTATAAGACAGATCTCCCTGAAGATGATCAACTGAATGTTGCATTTGTGGATGTTGGACATGCCAGCATGCAAGTGTGCATTGCTGGCTTTAAGAAGGGGCAGTTGAAAGTATTAGCTCATTCATTTGATAGATCTCTAGGTGGTAGAGATTTCGATGAAGTTTTGTTCCATCACTTTGCTGCAAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAAGGCTTGTCTAAGGCTGAGAGCTGGTTGTGAGAAGCTGAAGAAGGTGCTCAGTGCAAATCCTGAAGCACCTCTTAACATTGAATGCTTAATGGACGAGAAAGATGTTAGGGGCTTCATCAAACGTGATGAATTCGAGCAATTAAGTGTTCCAATATTGGAACGAGTTAAAAAACCTTTGGAGAAGGCTCTTGTGGAAGCAGGTCTTATGGTTGAGAATGTACATATGGTTGAGGTAATTGGTTCAGCTTCTCGTATACCAGCTATATACAAGATATTGACAGATTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGTGCCTTGCAGTGTGCTACTCTTAGCCCAACATTTAAAGTACGAGAGTTTCAGGTCAATGAAAGCTTTCCTTTCCCAATTTCTCTGTCATGGAAAGGCTCTGGTCCAGATCTACAGGAAAGTGGACCCGATAATCAGATGAGCACTGTTGTTTTCTCTAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTATAGGTCGGAAACATTTTCTGTTGATGTACAGTATGCTGATGTGAGTGAGCTGCGGACACCTCCAAAGATCAGCACATATACTATTGGTCCTTTGCCAAATACAAAAGTTGAGAAAGCAAAACTTAAAGTGAAAGTAAGATTGAATCTGCATGGAATTGTATCTATTGAGTCAGCAACTCTTCTGGAGGAGGAGGAAGTTGAGGTTCCGGTGACCAAAGTTCCAGCTGGAGAAAGTGCCAAGATGGACACTGACGAAGTTCCTGCTGAGGCTGCTGCAGCACCTCCAAGTTCCAATGATGCTGATGTTGAGATGCAAGATACTAAGGCAACTGTTGACGCCCCTGGGATGGAAAATGGCAACGCTGAGACTGAGGATAAGCCTGTGCAGATGGATAATGATATCAAGGTTGAGGCTCCAAAGAAAAAGGTCAGGAAAACAAACATACATGTAACAGAGTTGGTATATGGAGCAATGAGTAGTTCAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAGAATGCTGTTGAGGCTTATGTTTATGACATGAGGAACAAGCTCAGCGACAAATACCACGAGTTTGTCACGGATTCAGAGAGAGAGGCACTTACCGCTAAACTTCAGGAGGTGGAAGACTGGTTATATGAAGATGGCGAGGATGAAACTAAAGGTGTTTATGTTGCCAAACTTGAGGAACTTAAGAAGCAAGGTGATCCAATTGAGGAGCGTTACAAGGAATTCATGGAGAGGGGCACAGTAATCAATCAGTTAATCTATTGTATAAATAGCTACAGGGAAGCAGCAATGTCAAACGATCCCAAGTTTGATCACATTGACATTTCTGAGAAGCAGCAGGTCCTGAATGAATGTGTTGAAGCTGAGGCTTGGTTTAGGGAGAATAAGCAGCAGCAGGACTCTCTTCCAAAACATGCCAACCCTGTACTCTTGTCGGCTGAAGTAAGAAAGAAAGCAGAGGCAGTCGATAGATTCTGTAAGCTAATTATGACTAAATCAAGGCCAGCCAAGCCGGCTACCCCTGAAGCGACACCAGCACCAACTGCGACACCACCACCTCCTCAGGGTGTTGAGCAGGAGCAACAACCTCAGGGAGATGATAATGCTGGCGATCACGCAGAGCAGGCGCCCCCACCAGCGTCTACTGAACCAATGGAGACTGATAAGTCAGAAAATTCAGGCGCTGCATAA 2565 0.4394 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFMVTEGPDGYPLIHARYLGENKTFTPTQVLGMVFSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPEDDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNAKACLRLRAGCEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSVPILERVKKPLEKALVEAGLMVENVHMVEVIGSASRIPAIYKILTDFFKKEPRRTMNASECVAKGCALQCATLSPTFKVREFQVNESFPFPISLSWKGSGPDLQESGPDNQMSTVVFSKGNVIPSIKALTFYRSETFSVDVQYADVSELRTPPKISTYTIGPLPNTKVEKAKLKVKVRLNLHGIVSIESATLLEEEEVEVPVTKVPAGESAKMDTDEVPAEAAAAPPSSNDADVEMQDTKATVDAPGMENGNAETEDKPVQMDNDIKVEAPKKKVRKTNIHVTELVYGAMSSSDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLSDKYHEFVTDSEREALTAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFMERGTVINQLIYCINSYREAAMSNDPKFDHIDISEKQQVLNECVEAEAWFRENKQQQDSLPKHANPVLLSAEVRKKAEAVDRFCKLIMTKSRPAKPATPEATPAPTATPPPPQGVEQEQQPQGDDNAGDHAEQAPPPASTEPMETDKSENSGAA 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0380 854 CDD HSPA4_like_NDB 2 381 - -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 4 107 214 - -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lele40g0380 854 PRINTS 70kDa heat shock protein signature 363 383 - -
Lele40g0380 854 PRINTS 70kDa heat shock protein signature 2 15 - -
Lele40g0380 854 PRINTS 70kDa heat shock protein signature 332 348 - -
Lele40g0380 854 PRINTS 70kDa heat shock protein signature 30 42 - -
Lele40g0380 854 PRINTS 70kDa heat shock protein signature 140 160 - -
Lele40g0380 854 Pfam Hsp70 protein 3 578 IPR013126 GO:0005524|GO:0140662
Lele40g0380 854 Gene3D - 186 360 - -
Lele40g0380 854 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 4 38 113 - -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 14 387 595 - -
Lele40g0380 854 MobiDBLite consensus disorder prediction 516 541 - -
Lele40g0380 854 Gene3D Actin; Chain A, domain 4 230 313 - -
Lele40g0380 854 MobiDBLite consensus disorder prediction 790 854 - -
Lele40g0380 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 697 IPR029048 -
Lele40g0380 854 Gene3D - 38 113 - -
Lele40g0380 854 Gene3D - 5 374 - -
Lele40g0380 854 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Lele40g0380 854 MobiDBLite consensus disorder prediction 798 816 - -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 4 597 707 - -
Lele40g0380 854 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lele40g0380 854 Gene3D - 597 707 IPR029048 -
Lele40g0380 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 708 795 IPR029048 -
Lele40g0380 854 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 595 IPR029047 -
Lele40g0380 854 PANTHER HSC70CB, ISOFORM G-RELATED 1 846 - -
Lele40g0380 854 FunFam Heat shock 70 kDa protein 4 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0380 Lele-ChrLele40 3073911 3079101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0380 4 496 Calmodulin-binding Proteins AT1G16030 32.600 8.87e-84 280