Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0378 ATGTCAACCTCAATAACAATGCCGAAGAAGCTTAAGAAATTCTTTAATTATTGCCTCTCCAAGATCAAAAACTCTCGTCCCCAGATCCACCCTTCTTCTCCTTCTGCTTCTTCATCTCCGATAATGCGGATCCTCTCAGGTTGTAAGCAACCCAAAACCCCTTCGTTTGCCGCCACCAGAGGAAACGACGACGACGCTGCTACGCTATCAGATGTCGATCGTTTCCTATTCGAGAATTTCAAATCTCTATTCCTCTACGACGACGAAAGTTTTTCTGAGAATAATAACAACAACGTTACGGATGATGGAGGCTCTGAGGAAAATCCCGGAGATCCGAAATCAGGATCCGATCCGCTCAATCCGATGTCGCCGGATCTTCCCGGTGACCTGAGGGAGTCTTCGGGTTCTCGGGAGAGCATCGTCTTATTGGAGTGGTCGGAGAACCCGTCTGAGGATTTCCGGCGATCTATGAAAGAAACGGTGGACGCGAGATTGAGGAATCACGGGAGGGTGGGTTGGGGATTTATGGAGGAGCTCTTGCTTTGTTACTTGAACCTGAATGAGAAGAAGTCACACAAGTTTATACTGAGTGCTTATGTGGATTTAATCAACGGTTTTCGTGAAAGCTCGTCGGAGAGCATTCCGGCGACGGCGAAGCCAGGGAGTGTTCGAACATTTAGGGCTGGAAGGGAGATCGGGAGGAACAAAGTGGCAATCCCTGGAATAGAGAAACGGGGCTGA 741 0.4872 MSTSITMPKKLKKFFNYCLSKIKNSRPQIHPSSPSASSSPIMRILSGCKQPKTPSFAATRGNDDDAATLSDVDRFLFENFKSLFLYDDESFSENNNNNVTDDGGSEENPGDPKSGSDPLNPMSPDLPGDLRESSGSRESIVLLEWSENPSEDFRRSMKETVDARLRNHGRVGWGFMEELLLCYLNLNEKKSHKFILSAYVDLINGFRESSSESIPATAKPGSVRTFRAGREIGRNKVAIPGIEKRG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0378 246 MobiDBLite consensus disorder prediction 94 135 - -
Lele40g0378 246 Pfam Transcriptional repressor, ovate 146 204 IPR006458 -
Lele40g0378 246 ProSiteProfiles OVATE domain profile. 142 205 IPR006458 -
Lele40g0378 246 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 206 IPR038933 GO:0045892
Lele40g0378 246 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 144 204 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0378 Lele-ChrLele40 3069169 3069909 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele40g0378 Ovate 1.6e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0378 40 3069169 3069909 Lele40g0378 40 3069169 3069909 ECH
Lele37g0431 37 3528828 3529547 Lele40g0378 40 3069169 3069909 hybridization
Lele38g0399 38 3219666 3221036 Lele40g0378 40 3069169 3069909 hybridization