Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0359 ATGTATTCACCGTCTCCGTCTCTGGAAACATCTCAGCCTGGCGACTATTTGCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCAAATTTTGTCAGCCCCATTGACACCTCTCCTCCAGCTACGACTCATTCCATTTCACCTCAGCCTGCCGACTACCGGTCTCCTCTTTCTCCGTCTTTTGGCAGCCCCATTGACACCTCTCCTTCAGCTCCGACTTATTCCATCTCACCTACTGCCACTCCGGCGGGGTTGGCGGAATCGAACGGAAAGTCCGGGGCTACAGTAATTGGAATAGTTATCGGAACTGTATCTGGCTTGCTGCTTATGCTCGTTTGTGTGGGCGTTTGGGCTTATAAAAGGAGAAAGCGGAGGAGGACGAGAAACGATGGTTTGGACGATTATTCTGCTGCTCCTCCTCCATCCCAACCCAAAGCTCCGCCCCAGCAATGGCAACATAGCAATCCTCCTCCAACCGATGGTGGATCAACACTGCCTCCCAAGCCAAGTCCACCCTCCGGAGTTCTGTTGAATCAGCAGGCGTCATCCCAGAATGTCGCATCCCCTCTTCTGTATTCTACAATTGGCACGAGTTCGGAATCTGAGAAACCATACCATGCGCCATCTCCTGCTGTTACCTTGGGACTGTCACAAAGTGCGTTTACATATGAAGAACTTGCATTTGCAACAAATGGATTCTCAGATTCAAACCTTATTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAACTGTTGCAATTAAGCAGCTCAAATCTGGGAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTGGAGGTCATTAGTCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCACTGCTGGAGCCCAGAGGTTGCTTGTATATGAGTTTGTCCCAAACAATACCCTAGAATTCCATTTACATGGGGCCGTATCTCAAATTTCAAATTTCAACGTATATGTAATGGTTTCATTCACTGTCATTCCAGGAAAAGATAGATCAACAATGGACTGGGCAACAAGGATAAAAATTGCCATTGGATCTGCAAAGGGATTGGCATATCTGCACGAGGACTGTCACCCGAGAATCATACATCGTGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATCAGATGCTGAAACCCATGTCTCCACACGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCTAGTGGTAAACTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGGAGAAAACCTGTTGATAAAACCGAGTCTTTTAAATTTAAAGATGACAGTATGGTTGAGTGGGTGGGTACAGTACACTATCTATATTTCTCTCTTAAGAAACAGATTATTTATGGCACTAAGACATTGTACAAATTACAGGCAAGACCTTTACTTTCTCAAGCTATGGAAAATAGCAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGAAGAGTTACGACTCTGATAAGATGCTTCGAATGGTTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCTAGGAATCGGCCTCGAATGAGCCAGGTAGTTCGGGCTCTAGAAGGAAATATTTCTTTGGATAATCTGAATGAGGGGAGCACATCTGGCCAAGGCAGAGCATTTAGTTCCTTTGAAAGTTCAGGTTATGATACCGGCCTATACAATAAGGACCTAAAGAAGTTCAGGAAGCTGGCCCTAGAACAAGAAACTAGTGAGTACAGTGGGCCCAGTAGCGATGGCGGTCAACATCAATCCACCTCAAGCAGTTCAGGCCTGGTAAATAGTGGGGAGAATATATAA 1989 0.4666 MYSPSPSLETSQPGDYLLPLPPPPPPPLLPPPPPPPPLLPPPPPLPPLPPLLPPLPPNFVSPIDTSPPATTHSISPQPADYRSPLSPSFGSPIDTSPSAPTYSISPTATPAGLAESNGKSGATVIGIVIGTVSGLLLMLVCVGVWAYKRRKRRRTRNDGLDDYSAAPPPSQPKAPPQQWQHSNPPPTDGGSTLPPKPSPPSGVLLNQQASSQNVASPLLYSTIGTSSESEKPYHAPSPAVTLGLSQSAFTYEELAFATNGFSDSNLIGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCTAGAQRLLVYEFVPNNTLEFHLHGAVSQISNFNVYVMVSFTVIPGKDRSTMDWATRIKIAIGSAKGLAYLHEDCHPRIIHRDIKASNILLDDNFEAKVADFGLAKFSSDAETHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKTESFKFKDDSMVEWVGTVHYLYFSLKKQIIYGTKTLYKLQARPLLSQAMENSNFDALADPRLQKSYDSDKMLRMVACAANCVRHSARNRPRMSQVVRALEGNISLDNLNEGSTSGQGRAFSSFESSGYDTGLYNKDLKKFRKLALEQETSEYSGPSSDGGQHQSTSSSSGLVNSGENI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0359 662 Gene3D Phosphorylase Kinase; domain 1 223 336 - -
Lele40g0359 662 Gene3D Transferase(Phosphotransferase) domain 1 365 596 - -
Lele40g0359 662 MobiDBLite consensus disorder prediction 64 104 - -
Lele40g0359 662 FunFam proline-rich receptor-like protein kinase PERK1 239 336 - -
Lele40g0359 662 FunFam Forkhead-associated domain-containing protein / FHA domain-containing protein 366 490 - -
Lele40g0359 662 ProSiteProfiles Protein kinase domain profile. 261 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0359 662 MobiDBLite consensus disorder prediction 1 104 - -
Lele40g0359 662 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Lele40g0359 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Lele40g0359 662 SMART serkin_6 261 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0359 662 MobiDBLite consensus disorder prediction 153 205 - -
Lele40g0359 662 MobiDBLite consensus disorder prediction 633 662 - -
Lele40g0359 662 MobiDBLite consensus disorder prediction 168 201 - -
Lele40g0359 662 MobiDBLite consensus disorder prediction 16 63 - -
Lele40g0359 662 MobiDBLite consensus disorder prediction 630 662 - -
Lele40g0359 662 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 136 628 - -
Lele40g0359 662 SUPERFAMILY Protein kinase-like (PK-like) 231 583 IPR011009 -
Lele40g0359 662 Pfam Protein tyrosine and serine/threonine kinase 265 490 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0359 Lele-ChrLele40 2949995 2955848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0359 70 638 Trihelix Transcription Factor Family AT1G70460 47.203 1.58e-150 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele40g0359 PK_Tyr_Ser-Thr 6.2e-45 CL0016