Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0347 ATGGACTTATGGGAAGGGCTGTTCAGCTTAGCTGATTTATCTGTGAATGGGATGAGGAAGCATGGAGCAGATCGTTTGTCCTTGCCTAGTTTTGGGTACATGTCAATATTCACCCGTCTTAGATACATGGAGTCTCAATTTTCCTGTGGCAATGTCTCAGTTTCAGTGTCACTCTTTGTGGTTTCTTCTTGGAAGGTGATGCTTCTGGTAACTTTGACCACTGATGGAAGTAGCGAAGTAGTGGGTTGGATAGAGAATAACGTATGGGTCCTTTATACTTATGCTGACGCTGAGAACGTCCTTGAGACGATCCTATGTATTGTAGCATCCACTAGTTGCCATGAGGGTTCAAACTTTCTGCAAGATAATATAAATAATAGTGTGTTGCTGCCTTTGGTGATGGGGAGTGAGGTGGATGCAGTGAAGGAGGCCCAAATAGTGGATGCCCGGGCAAGAAACATCAGTCACAATGTGAGGTGCACAGAATGTGGGAGTCAATCCATTGAAGATTCTCAAGCAGACATTGCGATTCTACTTAGAAAGTTAATCCGTGATGAGATTCGCGGTGGGAAGACAGACAAGGAGATATACAAAAAGCTTGAGGATGAATATGGAGAGACTGTACTCTATGCACCAAAGTTTGATTTGCAGACCGCAGCTTTATGGCTATGCCCTGTAAGTGCAGCAGCTGGTGTATGGGCTTACAACAGGCATAAGAAGAAGACTAATGTTCATATCATGGCTTTGAACCTTATCAGAGGTGTTCCATTGACCCCTAAAGAAAGGCAAACCATGCTTGATCTCCTTACACCACCTCCATCACAGAATCCAAGAACTCCCTTCTGGTGGAGGAGATGGCAAAATTATGATTCACTTTTTGTGGTTTTGATTCCCATTTCCCCCCCTTCTTTCTCCTTTTTGGCAATAATTTGCTACGTCATCTGGGCAGATAAAATGTCTCCCATGATTGTAGTGGATAGGATGTATTCTAAAGTTGCCTCTACAGTCTTTACCAGGTGGACAACATCACCTTCTGAATTGATGGAGTTGGTCACAGAATTTGCTAAACATGGGCTAGCAGCTCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAAGCAGCTCATATCTTCTGCACAGGAGATATCAAATCTCTTATGTGGAAATGACATGAAATCAGGAAATGTTGGTGGAGCTAGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTCGCTGCAATGCTAGGGACTTGGCTTAGTGGAGGCGTTGCTGTGCCTCTTGCACTGAGCTATCCAGAAGCAGAGCTATTGTATGTGATGAATAATGCTGATGTGTCCGCGATATTGAGTACTAAAGATCATAGTGAAACAATGCAAAATGTTGCCAATAAAAGCTCTTCTCAGTTTTTTCTTATTCCTCCTGTTCCCAATAAATCCTTGGAGAAGAGCAGAGATGAAGATTCACAAAGTAGAGAAATGCTGGCAGAAAGAATTCATCAGGGGAATATCAAAAGAACAACATTGATATTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGCCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAGACCTTGACAAAAGCGTGGGAGTACACATCTGCTGATCAATTTCTGCACTGTCTACCACTCCATCATATCCATGAAAATTTGATGTTTATTTTGACAGCAATTAATTTGATTTGA 1731 0.4252 MDLWEGLFSLADLSVNGMRKHGADRLSLPSFGYMSIFTRLRYMESQFSCGNVSVSVSLFVVSSWKVMLLVTLTTDGSSEVVGWIENNVWVLYTYADAENVLETILCIVASTSCHEGSNFLQDNINNSVLLPLVMGSEVDAVKEAQIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRGGKTDKEIYKKLEDEYGETVLYAPKFDLQTAALWLCPVSAAAGVWAYNRHKKKTNVHIMALNLIRGVPLTPKERQTMLDLLTPPPSQNPRTPFWWRRWQNYDSLFVVLIPISPPSFSFLAIICYVIWADKMSPMIVVDRMYSKVASTVFTRWTTSPSELMELVTEFAKHGLAAHDSVAIRADQKSYSYKQLISSAQEISNLLCGNDMKSGNVGGARIGIVAKPSAEFVAAMLGTWLSGGVAVPLALSYPEAELLYVMNNADVSAILSTKDHSETMQNVANKSSSQFFLIPPVPNKSLEKSRDEDSQSREMLAERIHQGNIKRTTLILYTSGTTGKPKGAVHTHRSISAQVQTLTKAWEYTSADQFLHCLPLHHIHENLMFILTAINLI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0347 576 SUPERFAMILY Acetyl-CoA synthetase-like 309 572 - -
Lele40g0347 576 PANTHER - 134 287 - -
Lele40g0347 576 Pfam Cytochrome C biogenesis protein 146 266 IPR005616 -
Lele40g0347 576 Pfam AMP-binding enzyme 362 572 IPR000873 -
Lele40g0347 576 Gene3D - 335 575 IPR042099 -
Lele40g0347 576 CDD CcmH_N 147 212 - -
Lele40g0347 576 ProSitePatterns Putative AMP-binding domain signature. 514 525 IPR020845 -
Lele40g0347 576 Gene3D Cytochrome C biogenesis protein 136 215 IPR038297 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0347 Lele-ChrLele40 2857514 2868108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0347 375 569 Acyl Lipid Metabolism Gene Families AT1G49430 25.472 5.07e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0347 40 2857514 2868108 Lele40g0347 40 2857514 2868108 ECH
Lele37g0391 37 3254889 3265173 Lele40g0347 40 2857514 2868108 hybridization
Lele38g0371 38 3006838 3013175 Lele40g0347 40 2857514 2868108 hybridization