Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0346 ATGATTTCAATCCTTAACTTATACTATACATGTTCATGGACTTTTCAATGCTTTGCTGGCCCCACTTTATGCTGGTTCCACGGTAGTTTTAGTAGAAAATACAATTTTCAATGCTTCTTCCCAAGCAAAGACAAAATTAGAAAAACAGCTTTATTTCATGATCAACTGGCCTCTAAACTTCCTGAGAATCTAATGTCTTTCATGAAGGTTGACTTTATGCCCAAATTTAGCGTGAGCGGAATTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGACGCTATAACTGTGTTCACTGGAGTTCCAACTATTTACACCAGATTGATACAAGGTTACCAAGCAATGGACCCTGAGTGCCAAGCCGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATAACCGGGCATCGGCTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCAGGCACTGTTGGCAAACCTTTTCCTGGTGTTCAGGTTAAGATTCTTGCAGATGAGGAGAGTGGAAGTAATGTAAATAAAGTGGGCGAGCTTTGCATTAAAAGCCCATCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTCATTGATGATGGCTTCTTCAGAACTGGAGATGCAGTCACTATGGACGAACATGAATATTACATCATTTTAGGACGTACCAATGCCGATATAATGAAGGTCGGTGGCTACAAACTATCTGCACTAGAAATTGAATCAGTTCTATTAGAGAACCCAGCTGTGTCAGAATGTTGCGTGTTGGGCTTACCGGACAAAGATTACGGAGAAGTAGTTTGTGCAATTATTGTGGCAGAGGCTGAGACTAAGGAAAAGAGAGAGGAAGAGTCAAAACCTGCTTTATCCTTAGAAGAATTGTCATCTTGGGCCAAAGACAGACTTGCACCTTACAAGGTATCCCTTCATCATCTGTCACTGTTCTTTCCATTTATGCATAGAATATGTCAATTTTCATTGACACCAATTCATTTGATCCTTATATTCCTATGTTGCCAGATACCCACTCGATTGTTCCTTTGGGACTCTCTTCCTCGCAATGCAATGGGGAAGGTGAACAAGAAAGAGTTGAAGAAATTGCTGGCTCCGGGGCAGTAA 1236 0.4223 MISILNLYYTCSWTFQCFAGPTLCWFHGSFSRKYNFQCFFPSKDKIRKTALFHDQLASKLPENLMSFMKVDFMPKFSVSGIWQRWRESYPVEGTKAEDAITVFTGVPTIYTRLIQGYQAMDPECQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEESGSNVNKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFRTGDAVTMDEHEYYIILGRTNADIMKVGGYKLSALEIESVLLENPAVSECCVLGLPDKDYGEVVCAIIVAEAETKEKREEESKPALSLEELSSWAKDRLAPYKVSLHHLSLFFPFMHRICQFSLTPIHLILIFLCCQIPTRLFLWDSLPRNAMGKVNKKELKKLLAPGQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0346 411 Pfam AMP-binding enzyme C-terminal domain 278 346 IPR025110 -
Lele40g0346 411 Gene3D - 40 261 IPR042099 -
Lele40g0346 411 PANTHER ACYL-COA SYNTHETASE 71 405 - -
Lele40g0346 411 Gene3D - 265 411 IPR045851 -
Lele40g0346 411 SUPERFAMILY Acetyl-CoA synthetase-like 98 346 - -
Lele40g0346 411 Pfam AMP-binding enzyme 99 268 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0346 Lele-ChrLele40 2853727 2857466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0346 119 407 Monolignol Biosynthesis Gene Families AT4G19010 24.490 1.09e-22 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0346 40 2853727 2857466 Lele40g0346 40 2853727 2857466 ECH
Lele38g0370 38 2997987 3004407 Lele40g0346 40 2853727 2857466 hybridization