Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0341 ATGGGTGGGAACCCTAACTTGTGGAACAATATGCATGACGCTGCTTATGTTGTTGGATCTTCCATTCCTTTCAATTCGCCGATCCCTCAAAACTCTCATCAGCCTCCTCCTTCCACCTGGAGCCAACTCCTCTTCTCAGGAGCACCAGGAGAAGAACAGAGATTGAGTTATGATCATTTTCAAGCAAAGAAGTTGGGCAAGTGGGAAGAACAGGTTCTGAATAATCCATCCTTCTCCAGAGTTCATCTTGTTGAAGAATTAATAAAGCAAGAGGCTTGCTTGTACGGCCATGGTGGTGGTGGTGGTGATGAGGAATTTCAGGGTCCTTCTTCTTCAGCAGCTAATTGGGCACACATGGTGGTTCCTGCTGTTTCTTCTCCCCCTAGGTCGTCTTGCATCACTAGCAGTCATAATATTAACAACGACGACGACGACGGCATTGTATTGCATTCTTTCTCTTATAACAAGGCTCCTCACACTAAGAAAACTCATCTTCCTCCTGCTGCAAATCTTTCATCTGAGGTGAGGAAGGAGAAGTTAGGAGATAGAATATCTGCCCTTCACCAACTAGTTTCTCCTTTTGGAAAGACCGACACAGCTTCAGTGTTGTCAGAAGCCAGTGGATATATCAGATTCCTTCATGGTCAAATTGAGTTGAATCATGGAGAGAGGAATTCTGTATTCCCAGAGGACCCTGGACAGCTGTTGAATAGTGACTCTTCCCTCAAAAGAAATGGAGCTCCAAACCAGGAAAATGGAGAAGAAAAGGCAAAGGACTTGAGAAGCAAGGGGTTATGCTTGGTGCCTATGTCTTTGAGCCATCGTTTTGGAAGTGATCGTAATAGTATTGGAGCTGAGTTTGGGTCAGCCACTTACGCCTCCGAAAACCAACAAATCCCAAAGGAAGGCAAATCAGAAGAGGAACGCAGAGACTACGAGATGACTGCTACGCTTAAAACCTCCTCAACCCTTTTGAGTGGGCTTATCTATAGTAAACCCAATCCGTTGAGGAATTTGTCTCTGCGTTCAAATCTCGAGTCTCTAAAGGCTGCGCCTTTGGAAATGGCGGCAGATAAGTGCAGTAACACGGCTCTCCTTGTCATTGACATGCAGATAGACTTCATAGAAGATGGGGGCCCCATGGTAGTAAAAGGAGGCAAAGCGATAGTCCCCAATGTTGTTAAGGCTGTCGAAGTTGCTAGACGGCATAGTATGCTCATAGTTTGGGTTGTACGTGAACACGATCCCTTAGGAAGAGATGTTGAACTCTTCCGACGGCATTTATACGGAACAGGGGTGGTCGGGCCCACCACTAAGGGAAGTGAAGGTGCAGAATTAGCTGATGGCTTGGTAATTAGAGAAGGGGATTATAAGTTGGTGAAGACAAGGTTTAGTGCATTTTTTGCTACACATCTTCATTCACTCCTTCAAGGAGCAGGGATCAATAGTCTAGCGATCACTGGTGTTCAAACTCCAAATTGCATCAGGCAGACTGTTTATGATGCTGTAGCATTAGACTATCAACCTGTTACTGTTCTTGTCGATGCCACTGCTGCTGCCACACCTGATATCCATCATGCCAACTTATTTGACATGAAAAATATTGGAGTTGCAACTCCAACATTACAAGAATGGAGCAATATGTGTGAAGCTTGA 1656 0.4511 MGGNPNLWNNMHDAAYVVGSSIPFNSPIPQNSHQPPPSTWSQLLFSGAPGEEQRLSYDHFQAKKLGKWEEQVLNNPSFSRVHLVEELIKQEACLYGHGGGGGDEEFQGPSSSAANWAHMVVPAVSSPPRSSCITSSHNINNDDDDGIVLHSFSYNKAPHTKKTHLPPAANLSSEVRKEKLGDRISALHQLVSPFGKTDTASVLSEASGYIRFLHGQIELNHGERNSVFPEDPGQLLNSDSSLKRNGAPNQENGEEKAKDLRSKGLCLVPMSLSHRFGSDRNSIGAEFGSATYASENQQIPKEGKSEEERRDYEMTATLKTSSTLLSGLIYSKPNPLRNLSLRSNLESLKAAPLEMAADKCSNTALLVIDMQIDFIEDGGPMVVKGGKAIVPNVVKAVEVARRHSMLIVWVVREHDPLGRDVELFRRHLYGTGVVGPTTKGSEGAELADGLVIREGDYKLVKTRFSAFFATHLHSLLQGAGINSLAITGVQTPNCIRQTVYDAVALDYQPVTVLVDATAAATPDIHHANLFDMKNIGVATPTLQEWSNMCEA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0341 551 Gene3D - 336 551 IPR036380 -
Lele40g0341 551 MobiDBLite consensus disorder prediction 223 259 - -
Lele40g0341 551 PANTHER OS02G0276400 PROTEIN 356 547 - -
Lele40g0341 551 CDD cysteine_hydrolases 364 533 - -
Lele40g0341 551 Pfam Isochorismatase family 363 538 IPR000868 -
Lele40g0341 551 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Lele40g0341 551 SUPERFAMILY Isochorismatase-like hydrolases 360 547 IPR036380 -
Lele40g0341 551 MobiDBLite consensus disorder prediction 291 310 - -
Lele40g0341 551 MobiDBLite consensus disorder prediction 231 248 - -
Lele40g0341 551 CDD bHLH_AtbHLH_like 170 218 IPR045239 -
Lele40g0341 551 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 220 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0341 Lele-ChrLele40 2814763 2825733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0341 36 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 34.444 1.42e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0341 40 2814763 2825733 Lele40g0341 40 2814763 2825733 ECH