Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0324 ATGGCACCCCACATGTCAAAGTGCAGCAACAACCTTCAAAGAACAGTGTCGGACATATCCTACGAGATCTCAAAAGAAGAAGTCCAAGATCTCAAGGCACTGCCGGCAATATCGGAGGTTGAGGATGCCAAGTGTGAGTGTTGTGGGATGAGCGAGGAGTGCACGACGGAGTACATAGAGCGCGTGAGGGACAAGTACTTGGGGAAGTGGGTGTGTGGGCTGTGTGCTGAGGCAGTGAAGGAAGAGCTTGAGAAGAATGGAGGGAGGAAAGTGGAAGCCCTAAACGCACACATGAGCGCGTGTGTTAAGTTCAACAAGTATGGTAGGGCTTTTCCTGTTCTGGTTCAAGCTCAGGCCATGAAGGAGATGTTGAAGAAGAGCAATAAGTTTGATGGAAGAAGAGTCAAGTCCTTTAACCCAAGAGACTCCAACAATGATAAGAAAGGAGGCCTTGCAAGGAGTTCAAGCTGCATCCCTCAGCTATAA 486 0.4897 MAPHMSKCSNNLQRTVSDISYEISKEEVQDLKALPAISEVEDAKCECCGMSEECTTEYIERVRDKYLGKWVCGLCAEAVKEELEKNGGRKVEALNAHMSACVKFNKYGRAFPVLVQAQAMKEMLKKSNKFDGRRVKSFNPRDSNNDKKGGLARSSSCIPQL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0324 161 MobiDBLite consensus disorder prediction 135 161 - -
Lele40g0324 161 Pfam Protein of unknown function (DUF1677) 40 126 IPR012876 -
Lele40g0324 161 PANTHER OS01G0745000 PROTEIN 32 160 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0324 Lele-ChrLele40 2665740 2666225 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0915 41 18644887 18654110 Lele40g0324 40 2665740 2666225 CCT
Lele42g0895 42 21701590 21710379 Lele40g0324 40 2665740 2666225 CCT
Lele40g0324 40 2665740 2666225 Lele40g0324 40 2665740 2666225 ECH
Lele37g0368 37 3094571 3095062 Lele40g0324 40 2665740 2666225 hybridization
Lele38g0345 38 2800898 2801386 Lele40g0324 40 2665740 2666225 hybridization