Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0309 ATGGCTGTGGAATTCAGATGCAACTGGGCTTGGCTCTCGTTGTTATGGTTTGTCTCTGTAACAGTATCTGCAATTCAGGAAGTTGATGGGATTTCCATAGTTCTGGCTGCAGAGAAGAACTCTGCAAATCACAAACAGGCCAGAAGGAAATTAGATGATGTGGGTGGCTCTATTGACATTGATTGTGGCCTACTTAATGAGCATGGCTATACTGATAGCAAAACTGAGATACTCTATACTACAGATTCGAAATTCATCGAAACTGGAAAAAACCGGGACATATTGATTGAGTTCAATTTCAAAGGGCTTGAAGGAATATTTAGAAATGTAAGAAGCTTTGCTGAGGCATTGGAAATGAGGCATCTTCACAGTTCCATTTATAACAAATCTCGAACCTTAGCTCTCTATAAACGTCTTGACTTTGGTTCAACAACCCATGAAATAGTGAGGTTTAAAGAAGATTCCTATGATAGGATTTGGTATCCTTACAATTTACCTAATTGTGAGCCATTGAGTACGAACTTGACCATTGATTCCTTTAACAATGCATATCGGCTACCATCAACAGTAATGAGAACTGCCGTAACACCAACTAATAGTAACGAACCCCTCGAAGTTCGGTTTGACGCTGGTGATCCTATTTTAAAGTTCTATGTTTTTATGCACTTTGCTGAGATTAAGGAGCTCCAGGAAAATGAGCACAGAGAATTCAACATTACAGTGAATGGGAAATTGTTGGATGAGTCTGTAGATTATGTAGTCCTTAATTATTTAGACCCTACCACATTTCATAATCCACAGCCCATCACAGGACCCAACCTTTGGTTCACTTTGAACAGGAAAAACAATTCCACCCTCCCTCCAATTCTCAATGCAATGGAGATTTACTATGACAAAGATTCATATCAGCAACCTACAGACCAAGAAGAGGTTAATGCTATCATGGACATCAAAGAAGCCTACACTATTAAGTCATGGCAAGGAGATCCTTGTGCACCACAAATGTATTCCTGGGATGGACTTAACTGCAGTTACAATGGATATAATGCACCTAGAATAATTGAATTAAATCTATCCTCCAGCAACTTGTCGGGAACAATAAGTCAATCATTTTCCATGCTTAAATCTTTAGAACATTTGGATTTATCAAACAACAGATTAACTGGATCACTGCCTGATTTTTTCATTAATTTGCCACGCTTGAAGACTCTAAATTTATCAGGAAACAGGCTCTCTGGTGAAATTCCATCACCTCTCAGGGAAAGATCAAGTAATGGGTCACTTTTGTTGAGTGTAGAAGGAAATCCTGATCTTTGCCAGAATCCTCCATGCAAAGAGGACAATAGTACTTTTCCACTTCATGCAGTCATAGCCATTATTTCATCTGTAGTCTTTTTAATTGTACTGGGTATTTTAGTCTGCATTATCTGGAGAAAGAAATTCAGCAAAAAACCAGCAAATCAGCCGGTGACATCGCGTGAGGAAGTTGTGCTGAAGTCAAGCAATACGCAATTCACGTACTCCCAGATAATAGATATTACCAATAACTTCGAGAAAATGATTGGAAAAGGAGGATCTGGAACTGTTTATCATGGCTCCTTATTTGATGACACACAAGTTGCTGTCAAACTGCTCTCATCATCAGAAAGCTCTAAGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAATGAAGGCGAACACACTGCAATCATATATGAGTTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAATGAAAGAATTATCAAGTTGGAAAAATAGGATTCAGATAGCAGTCGATGCCGCTCAAGGACTTGAATATTTGCATCATGGATGCAAGCCTCCTATAGTTCACAGGGACATAAAGACATCAAACATTTTGCTGAATGAGAAATTGCAAGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTTCTTTTCAACAGAAAGCGAAAGCCATATATCAACCGGAGTCATTGGTACATTCGGGTACCTTGACCCAGAATACTACTCATTCAACAGGCTTACCGAGAAAAGTGATGTTTATAGCTTTGGCATTGTGCTTTTGGAGCTTATTACAGGGCAGAGAGCAATAATTAAAGGTCAAGAGAACACTCACATTGTGAATTGGGTTACCGCTTTTGTGAAAAGAGGAGATCTGCAACAAATTGTGGATCCAAGGTTGCAGGGAGATTTTGATTTTGGTTCTATGTGGAAGGCTGTGGAAGCAGCAATAGCTTGTGTATCTCCAACCTCCATCCAAAGACCATCAATGAGTTATATTGTCCCAGAATTAAAAGAAAGCTTAGAAATGGAAACAGCTCATCAACAAAAGTGGGCTACAGATGGAAAAATGATGAAATCAAACAGCTCATTCCACACTCATGTTGATCTTGAAGCTGCCTCTGGTCCAGAAGCAAGATAG 2472 0.3928 MAVEFRCNWAWLSLLWFVSVTVSAIQEVDGISIVLAAEKNSANHKQARRKLDDVGGSIDIDCGLLNEHGYTDSKTEILYTTDSKFIETGKNRDILIEFNFKGLEGIFRNVRSFAEALEMRHLHSSIYNKSRTLALYKRLDFGSTTHEIVRFKEDSYDRIWYPYNLPNCEPLSTNLTIDSFNNAYRLPSTVMRTAVTPTNSNEPLEVRFDAGDPILKFYVFMHFAEIKELQENEHREFNITVNGKLLDESVDYVVLNYLDPTTFHNPQPITGPNLWFTLNRKNNSTLPPILNAMEIYYDKDSYQQPTDQEEVNAIMDIKEAYTIKSWQGDPCAPQMYSWDGLNCSYNGYNAPRIIELNLSSSNLSGTISQSFSMLKSLEHLDLSNNRLTGSLPDFFINLPRLKTLNLSGNRLSGEIPSPLRERSSNGSLLLSVEGNPDLCQNPPCKEDNSTFPLHAVIAIISSVVFLIVLGILVCIIWRKKFSKKPANQPVTSREEVVLKSSNTQFTYSQIIDITNNFEKMIGKGGSGTVYHGSLFDDTQVAVKLLSSSESSKQFQTEAELLMRVHHRNLASFLGYCNEGEHTAIIYEFMAYGNLEKCLSGSMKELSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKLQAKVADFGFSKFFSTESESHISTGVIGTFGYLDPEYYSFNRLTEKSDVYSFGIVLLELITGQRAIIKGQENTHIVNWVTAFVKRGDLQQIVDPRLQGDFDFGSMWKAVEAAIACVSPTSIQRPSMSYIVPELKESLEMETAHQQKWATDGKMMKSNSSFHTHVDLEAASGPEAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0309 823 PRINTS Leucine-rich repeat signature 398 411 - -
Lele40g0309 823 PRINTS Leucine-rich repeat signature 377 390 - -
Lele40g0309 823 SUPERFAMILY L domain-like 325 421 - -
Lele40g0309 823 FunFam Leucine-rich repeat receptor-like kinase 309 441 - -
Lele40g0309 823 CDD STKc_IRAK 521 783 - -
Lele40g0309 823 Pfam Malectin-like domain 113 297 IPR024788 -
Lele40g0309 823 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Lele40g0309 823 SMART LRR_typ_2 374 397 IPR003591 -
Lele40g0309 823 SMART LRR_typ_2 398 426 IPR003591 -
Lele40g0309 823 Gene3D Ribonuclease Inhibitor 310 438 IPR032675 -
Lele40g0309 823 SUPERFAMILY Protein kinase-like (PK-like) 493 779 IPR011009 -
Lele40g0309 823 Gene3D Phosphorylase Kinase; domain 1 479 588 - -
Lele40g0309 823 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 589 794 - -
Lele40g0309 823 Pfam Protein tyrosine and serine/threonine kinase 517 728 IPR001245 GO:0004672|GO:0006468
Lele40g0309 823 ProSiteProfiles Leucine-rich repeat profile. 376 399 IPR001611 GO:0005515
Lele40g0309 823 Pfam Leucine rich repeat 355 411 IPR001611 GO:0005515
Lele40g0309 823 PANTHER OS07G0107800 PROTEIN-RELATED 112 785 - -
Lele40g0309 823 Gene3D Transferase(Phosphotransferase) domain 1 589 809 - -
Lele40g0309 823 SMART serkin_6 515 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0309 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Lele40g0309 823 ProSiteProfiles Protein kinase domain profile. 515 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0309 Lele-ChrLele40 2490797 2496481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0309 109 823 Receptor kinase-like Gene Family AT1G51800 44.790 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele40g0309 PK_Tyr_Ser-Thr 4.2e-46 CL0016