Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0303 ATGCATCTTCTACAGGTAAGAAGAAGATTCTCTGCAGAATCTCCTCCGGCAATCGGAAGATTCCATCGGAGCCGTCGAGCTTGTGAGCTTTTTTGCTTGTGGAAGCCATGGACTGGTCAGTCTTGTTGCTACTACGTAGCACTTTTCTTCTCTTTTCTCACAGGTAGTCTGGTTTTTGCACTTGTTCAATCTCAGGATCAATCAGGGTTCATAAGCATAGATTGTGGGATACCTGCAACATCCAACTACACAGAGAGGATAACAGGCTTAAATTACATATCAGATGACAAGTTCATAAATTCTGGAGTGAGTAAGTCCATAACCGATGATCTCAAAAGTATGTATCAGCAGCAATTTTGGAACATGAGAAGCTTTCCTCAAGGAACAAGAAACTGTTACAGAATAAACATCACAAGTGGGTCTAAATATCTGATAAGGGCTACTTTTCTGCATGGGAATTATGATGGCCAGAATGAGTTGCCAAGTTTTGATCTTCATCTTGGGCCTAACTTGTGGGAAACTGTGAAAATAAACGATGCATCAATTAGCAAAAACCTTGAGATCATACATGTTCCATCACTAGATTACATTCAAATCTGTCTCGTTGGCACAGGCTCTGGAACCCCATTTATCTCTACTATAGAATTAAGGACTTTGATGAACAATACTTATGTTACATACTTTGGATCCTTGTCACTTTACTTGAGGTGGGATTTAGGCTCAACCAACAACAGAACATACAGGTATAGTGATGATGTTTATGATCGCTTCTGGACATATAATACTGACTACAACCCAGACTGGACGCAAATAAGTGATTCAATCTCTGAAGATACCTTAACTCAAAATCTGTTCAAACCACCAGCTATTATTATGAGCAATGCAGCCACACCAGTAAATGAAAGTGATCCAATGTTAGTAGAATGGGAGCCAGAAGATCCAACAGACCAATTCTATGTTTACATGCATTTTGCAGAGCTTCAAGTATTGGAAAAGAATCAGACAAGATCATTCATCATTACCCTCAATGGAGATCTCTTTTATGGTAATCTTGTACCTAAGTACCAAGTTACAACCACTATATTCAGCAAGTATCCTACCAGAGGAGACAAAATTACGTTTTTACTTCAGAAGAATGATAATTCAACCCTCCCTCCCATTCTCAATGCTATTGAGATTTATACTGTTAAAGGATTTTCCCAAGCAGAAACAGATCAAGGAGATGTTGATGCAATCACAAGAATCAAGTCTTCTTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGCCCTGTGGCCTACATTTGGGAAGGTCTGAATTGTACTTATAATGGCCAGAATTCCCCAAGAATCACATCCCTGAATTTATCTTCAAGTGGATTGACAGCACAGATACATCCTTCCATCTCAAAGCTCACCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAATGGAGCATTGCCTGTTTTCCTGTCTCAACTACAAAACTTGAAGATCTTGAACCTGGAGAGCAACAACTTCACAGGTACAGTTCCTTCTGATCTGGTTGAAAAATCAAAGAAAGGAACCCTGTCTCTAAGTGTTGGACAAAATCCATATCTATGTGAATCTCTTCCGTGCAACAAGAAGGAAAAGAACAATATTAGTATTCCTATAGCGGCATCAGTTGGTGGAGTTCTGATCCTTCTGGTAGCTGCAGCAACTATATTTTTTACCTTTAAATGGAGAAAACAAAGAGGAACAAGTCCAATTCAGACCTCACAGAAAGTTGAAAAATCTGAACAACAAAAAGATATGACTCTGCATGTCACAAATAGACAATATTCATACCATGATGTCCTCAGAGTGACCAATAACTTCAGCACAATTCTCGGAAAAGGTGGGTTTGGAACAGTTTATTTGGGCTACCTTGATGAAACTCCTGTTGCAGTTAAAATGCTCTCTCTATCTTCATTTCAAGGTTATCAGCAATTCCAAGCAGAGGTGAAACTTTTAATGAGAGTTCATCACAGAAATCTGACTTCCCTTATTGGGTATTGCAATGAAGAAACCAATAAGGGGCTCATATATGAGTACATGGCTAATGGTAACCTACAAGAGTACCTTTCAGGTAAAGACAACAAAACAAAGTTCCTGACTTGGCAAGACAGATTATTTATAGCACTTGATGCAGCATTAGGGTTGGAGTATCTGCATAATGGATGTAAACCACCTATAATTCATAGAGATGTAAAATCCTCAAACATCTTGCTGAATGAGAACTTTAGAGCAAAAATATCTGACTTTGGTCTATCAAAAACTATGCCAACTGATGGTGGAACTCATGTGTCAACTGTTGTTGCCGGTACTCCCGGTTATCTAGACCCTGAGTACTATATAACAAACAGATTGACAGAGAAAAGTGATGTTTTTAGTTTTGGAGTAGTTCTTTTCGAGATAATCACAGGTCTGCCAGTCATATCCAGAAACCATGAGAGAACTCACATAAGTCAATGGGTTAGCTCCATGGTTGATAAAGGGGATATAAAGGCCATTGTTGACTCAAAGTTAAGTGGGGACTTTGACAGTAACTCTGTTTGGAGAGCTGTTGAAATGGCAATGACTTGTGTGTCTCGAAACCACAACAACAGGCCAACCATGAGGGAGGTGGTGAGTGAGCTAAAGGAGTGTTTGGCAACAGAAGTAGCTAGAACCAAACACAGTTGTGCTGATACAGGAGACTCAGTTGAATTGGTGTCCCTGAATATGACAAGTACAGAATTCTCTCCCTTGGCCAGGAACTTTGGTGTTTTGAATCAAATGAAAGATCCTTGTGACGAATACAAATTGCTGAAGATGAAGGTAGAGCAAGACTTGCAGTCTGTTTCTATACTAAAAATATTTGCTTCTGTACAACTGCTTGGGCATTCTGATGATCTGATGACGCCCAAAATGTTGGTGCAATAG 2955 0.3942 MHLLQVRRRFSAESPPAIGRFHRSRRACELFCLWKPWTGQSCCYYVALFFSFLTGSLVFALVQSQDQSGFISIDCGIPATSNYTERITGLNYISDDKFINSGVSKSITDDLKSMYQQQFWNMRSFPQGTRNCYRINITSGSKYLIRATFLHGNYDGQNELPSFDLHLGPNLWETVKINDASISKNLEIIHVPSLDYIQICLVGTGSGTPFISTIELRTLMNNTYVTYFGSLSLYLRWDLGSTNNRTYRYSDDVYDRFWTYNTDYNPDWTQISDSISEDTLTQNLFKPPAIIMSNAATPVNESDPMLVEWEPEDPTDQFYVYMHFAELQVLEKNQTRSFIITLNGDLFYGNLVPKYQVTTTIFSKYPTRGDKITFLLQKNDNSTLPPILNAIEIYTVKGFSQAETDQGDVDAITRIKSSYGVTRNWQGDPCGPVAYIWEGLNCTYNGQNSPRITSLNLSSSGLTAQIHPSISKLTMLEKLDLSNNSLNGALPVFLSQLQNLKILNLESNNFTGTVPSDLVEKSKKGTLSLSVGQNPYLCESLPCNKKEKNNISIPIAASVGGVLILLVAAATIFFTFKWRKQRGTSPIQTSQKVEKSEQQKDMTLHVTNRQYSYHDVLRVTNNFSTILGKGGFGTVYLGYLDETPVAVKMLSLSSFQGYQQFQAEVKLLMRVHHRNLTSLIGYCNEETNKGLIYEYMANGNLQEYLSGKDNKTKFLTWQDRLFIALDAALGLEYLHNGCKPPIIHRDVKSSNILLNENFRAKISDFGLSKTMPTDGGTHVSTVVAGTPGYLDPEYYITNRLTEKSDVFSFGVVLFEIITGLPVISRNHERTHISQWVSSMVDKGDIKAIVDSKLSGDFDSNSVWRAVEMAMTCVSRNHNNRPTMREVVSELKECLATEVARTKHSCADTGDSVELVSLNMTSTEFSPLARNFGVLNQMKDPCDEYKLLKMKVEQDLQSVSILKIFASVQLLGHSDDLMTPKMLVQ 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0303 984 Gene3D Transferase(Phosphotransferase) domain 1 696 914 - -
Lele40g0303 984 SUPERFAMILY L domain-like 414 519 - -
Lele40g0303 984 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 696 903 - -
Lele40g0303 984 FunFam Leucine-rich repeat receptor-like kinase 407 540 - -
Lele40g0303 984 SUPERFAMILY Protein kinase-like (PK-like) 599 890 IPR011009 -
Lele40g0303 984 FunFam Leucine-rich repeat receptor-like protein kinase 592 695 - -
Lele40g0303 984 Pfam Malectin-like domain 73 396 IPR024788 -
Lele40g0303 984 Gene3D Ribonuclease Inhibitor 410 529 IPR032675 -
Lele40g0303 984 ProSiteProfiles Protein kinase domain profile. 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0303 984 SMART serkin_6 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0303 984 Gene3D Phosphorylase Kinase; domain 1 592 695 - -
Lele40g0303 984 Pfam Protein tyrosine and serine/threonine kinase 624 890 IPR001245 GO:0004672|GO:0006468
Lele40g0303 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Lele40g0303 984 ProSitePatterns Protein kinases ATP-binding region signature. 627 648 IPR017441 GO:0005524
Lele40g0303 984 PANTHER OS07G0107800 PROTEIN-RELATED 71 897 - -
Lele40g0303 984 CDD STKc_IRAK 627 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0303 Lele-ChrLele40 2443315 2455880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0303 41 929 Receptor kinase-like Gene Family AT1G51800 49.452 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele40g0303 Malectin_like 4e-114 CL0202