Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0300 ATGAGAACTGCATCAACTCCAGCAAATGCTAGCAACAAAATGGAAGTTCATTTCCAGATTGGGAACAATGCATCCTCATATTTCGCATACATGTACTTTGCTGAAATACAGAAACTTCAAGCAAATGAAATCAGACAATTTAACATTTTTGTGAAGGGAGAACTTTTCAGTGCTGATTTCAGTCCTTCATATCTTCACGCCTTGAATTTTTTATCTCTAGGAAGTGGACCTTGGCTCAATATTTCGATCAATAGAACGGATAGATCAACTCTTCCTCCTCTTTTGAATGCCATTGAGATATATAACGATAAGAGTCTGACAATCTCGAAACCCAGCAAACAGATGGCAAAACTTGCTCAAGTTCACCATAAACACTTGACTGCTCTGATAGGATATTGTGATGATGGCACCAACGTTGCTCTCATCTATGAGCATATGGCTAATGGAGACTTAGCTAAGCATTTATCAGGTGAAGCTTATGAAGATATTTGA 492 0.3801 MRTASTPANASNKMEVHFQIGNNASSYFAYMYFAEIQKLQANEIRQFNIFVKGELFSADFSPSYLHALNFLSLGSGPWLNISINRTDRSTLPPLLNAIEIYNDKSLTISKPSKQMAKLAQVHHKHLTALIGYCDDGTNVALIYEHMANGDLAKHLSGEAYEDI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0300 163 Gene3D Phosphorylase Kinase; domain 1 97 147 - -
Lele40g0300 163 PANTHER OS07G0107800 PROTEIN-RELATED 1 108 - -
Lele40g0300 163 SUPERFAMILY Protein kinase-like (PK-like) 114 159 IPR011009 -
Lele40g0300 163 Pfam Malectin-like domain 1 102 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0300 Lele-ChrLele40 2420830 2424183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0300 118 163 Receptor kinase-like Gene Family AT5G59680 54.348 4.34e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele40g0300 Malectin_like 3.1e-24 CL0202