Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0297 ATGGCCACAGTACCAGGGCAGCTCGTGTGGGAAATCGTGAAGAAGAACAACTGTTTTTTGGTGAAGGAGTTTGGTAGGGGTACTCAGAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTTCTCTGGCTTGGCAAACAAGAAAACCATTACTATTCAGCCTGCTGGCAAGGATCAATCTGTGCTGCTGGCAACGACCAAGACAAAGAAGCAGAACAAGCCGGCTGCATTGCTTCATAAGTCTGTCATGAAAAAGGAGTTCCGAATGATGGCAAAGGCAGTAGAGAACCAGGTTGGAGATAACTACTACAGGCCTGATCTTAAGAAAGCAGCCCTTGCGAGGTTGAGCGCCATTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTAAAAAGAGGAACAGACAGGCTGTGAGGATTGCTGACCTCGTTCTGTCTGCTACATACATAATATATTCTGCTGCTGTTGCTGCCGAACAATCAGCAGCCATGTCGGTAAAGAAGTCTGCCTCTATGAACGGCGGTGACAAGGCCGCCGGAGCAGTTGAAAAAGCCAGGAAACGACGACGTTTCAATCGGTGGTTCTCGTTCGTGGAAGTATCTCTGGAGCCAGGGAAGCAACTGAAGGACATGGATTCCAACAAGCTCAAGGCTGAGATCAGGAGGTGGGCTAAGGCTGTTGTGGCCTATGCCCGCCAAGTCAGCGGCCGGTTTGGAAGCTCCGGTGGAAAATCTCAGAGATAA 762 0.4921 MATVPGQLVWEIVKKNNCFLVKEFGRGTQSVQFSKESNNLYNLNSFKFSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRMMAKAVENQVGDNYYRPDLKKAALARLSAIHRSLKVAKSGVKKRNRQAVRIADLVLSATYIIYSAAVAAEQSAAMSVKKSASMNGGDKAAGAVEKARKRRRFNRWFSFVEVSLEPGKQLKDMDSNKLKAEIRRWAKAVVAYARQVSGRFGSSGGKSQR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0297 253 FunFam 60S ribosomal protein L28 5 133 - -
Lele40g0297 253 Gene3D - 6 133 - -
Lele40g0297 253 PANTHER 60S RIBOSOMAL PROTEIN L28 1 145 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lele40g0297 253 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0297 Lele-ChrLele40 2411949 2415198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0297 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 75.524 1.95e-76 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0318 38 2522077 2525424 Lele40g0297 40 2411949 2415198 hybridization