LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele40g0289	ATGAGATCTCATGCATTGAATGCTTCACCAGATGCGAGGGTCATTTCCCAAATAAAACTGCAGGAACATGGCGCCTCATCTGCCCCACCTCTCACCGCCGATTTACAGCATTCCCAGTCTCTCTCTGCCTGCAACTACAAGCAAAAGAAAACTTTCATTTCACTCAGACATGATACTATTTCTGTTGTGGAATCTTTGGCAACTAGTGCTATTATCGATATTGAAGAAAGCCTTGAAATACATCAAATTTGTGGTCTCTTAGCTTGGAACTGCAATTTCTTGCTTTCTGAGCCAAAAGGGTATCTGATTCTTCACGGATTTGCTACTATTTTTGGGATCGTACTACTGAATCACTAACATTTTGCTTGCGTTTGGAGATTATTGGCGCTCATGAATCGGGAACAGAAGCGAGGGAAGCAAGAAAAAGAGTCTGACGGTGCTGAGGTGGTCATTGTTGCCGTAAAGGCATCGAAGGAAATACCTAAGACTGCTCTTGTCTGGTCTCTAACTCATGTCGTTCAACCTGGGGATTGCATTATTTTGTTAGTGGTTTTGCCTCCACAAAGCTCAGGTAGAAGATTGTGGGTGTTTCCAAGATTTGCTGGTGACTGCGCCAGCGGTAGCAAGAAGTCTCCTCCTTCAGGAACAACTTCAGAGAAGAAGTGTGAGATCAATGATTCTTGTTACCAGCTGATCCTTCGGCTTCATGATGTCTATGATCCAAATAAGATAAATGTCAAGATTCAAACTGTAGCTGGATCTCCTTGTGGAGGAGTAGCTGCAGAGGCCAAGAAAGTCCAGGCCAGTTGGGTTGTCTTAGACAAAGATCTCAAACATGAAGGAAAACGCTGCATGGAAGAATTGCAATGTAACATTGTAGCTATGAAGCGTTCTCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCCTGAAGAGGCCAGCCCATTACATTCTGTGAAAGAAACACCAGGAAAAGAAGCCAACCAGAAGAACGAATCTTTAAACGCCATAAAAGCACCTGTTGTAACCCCAACTAGCAGCCCGGAGCAAGAGACACCATTTACTGCTACTGAAGCTGGTACCTCATCAGTTTCGAGCTCAGATCCTGGGACCTCACCATTTTTTGTCTCAGAGATCAATGGTGAGTTGAAGAAAGAGGAGACAATTAAGGAAAATGAAGAACTTGATGATACTAATTCGGACAGAGACAGTGAAAATATGTCCACATCCTCAGCAAGCATGAGATTCCAGCCTTGGATCTCTGAAATGCTTCTACATCAACGATCATCTCAACGTACAGAAGAAAGATCTGAGAGATCTCATAATAAACCCCAAACATCTACAACCAGAGCCTTGCTTGAAAAGCTCTCAAGGCCCGAGAGCGATTCTGGATTTGAAATTTCAACCTATAGAAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCAATAGCATTATCTAGAAATGCTCCCCCTGGTCCACCGCCGTTATGTTCAATATGTCAACATAAAGCACCAGTTTTTGGAAAACCGCCAAGGTGGTTTAGCTATGCTGAGTTGGAGCTTGCTACTGGGGGATTTTCACAAGCCAACTTCTTGGCGGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCAGATGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCAAGTTCTCAGGGTGATCATGAGTTTTGCTCAGAGGTAGAAGTCTTAAGCTGTGCTCAGCATCGGAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACGACGGGATGTATTAGAGTGGTCTGCACGGCAAATAATTGCTGTTGGAGCTGCTCGAGGGCTACGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGGGACATGCGCCCAAACAATATTCTCATCACTCATGATTTTGAACCATTGGTATTGGATCCTTTGACTCCTTTGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGAAGTGGAAACTAGAGTCATCGGAACGTTTGGGTATCTGCTGTAAACTTCTTGTTACTGGGAGAAAAGCTGTGGATCTCAATCGACCTAAAGGCCAGCAGTGTCTTACTGAATGGGCGCGACCACTGTTAGAGGAATATGCCATCGAGGAACTGATTGATCCAAGGCTGGGAAATTGCTATTCAGAAAATGAGGTCCATTGCATGCTCCATGCAGCCTCATTATGCATACGGCGAGATCCTCATTCTAGACCTCGCATGTCGCAGGTTCTCCGAATGCTTGAGGGCGACATGGTCATGGAGGCAAATTACCTAACAACTGGTGGTTATGATGCTGGGAACCGGAGTGGTCGGATCTGGGCAGAGCAGCAGATGCAGCATCATTATAGTGGTCCCCTGCTGGATGAGCCCCTGGAATCAGCATTCAGTGGAAAGCTTTCTCTGGAGAAATACAGGTCTGCCTACTGGGAAGGGACAAAGCCTAAGCGAACTTCCATGTGA	2583	0.4483	MRSHALNASPDARVISQIKLQEHGASSAPPLTADLQHSQSLSACNYKQKKTFISLRHDTISVVESLATSAIIDIEESLEIHQICGLLAWNCNFLLSEPKGYLILHGFATIFGIVLLNHXHFACVWRLLALMNREQKRGKQEKESDGAEVVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPPQSSGRRLWVFPRFAGDCASGSKKSPPSGTTSEKKCEINDSCYQLILRLHDVYDPNKINVKIQTVAGSPCGGVAAEAKKVQASWVVLDKDLKHEGKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDPEEASPLHSVKETPGKEANQKNESLNAIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSEINGELKKEETIKENEELDDTNSDRDSENMSTSSASMRFQPWISEMLLHQRSSQRTEERSERSHNKPQTSTTRALLEKLSRPESDSGFEISTYRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRRRDVLEWSARQIIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVLDPLTPLLVILDWQGGSLMETLKWKLESSERLGICCKLLVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGNCYSENEVHCMLHAASLCIRRDPHSRPRMSQVLRMLEGDMVMEANYLTTGGYDAGNRSGRIWAEQQMQHHYSGPLLDEPLESAFSGKLSLEKYRSAYWEGTKPKRTSM	860

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	409	432	-	-
	Lele40g0289	860	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	653	665	IPR008266	GO:0004672\|GO:0006468
	Lele40g0289	860	Gene3D	Transferase(Phosphotransferase) domain 1	609	677	-	-
	Lele40g0289	860	Gene3D	Transferase(Phosphotransferase) domain 1	704	800	-	-
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	315	332	-	-
	Lele40g0289	860	FunFam	Dual-specific kinase DSK1-like	141	296	-	-
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	433	448	-	-
	Lele40g0289	860	SUPERFAMILY	Protein kinase-like (PK-like)	512	789	IPR011009	-
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	385	408	-	-
	Lele40g0289	860	ProSiteProfiles	Protein kinase domain profile.	532	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele40g0289	860	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	504	607	-	-
	Lele40g0289	860	Gene3D	Phosphorylase Kinase; domain 1	504	607	-	-
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	333	379	-	-
	Lele40g0289	860	Pfam	Protein tyrosine and serine/threonine kinase	536	668	IPR001245	GO:0004672\|GO:0006468
	Lele40g0289	860	PANTHER	OS01G0750732 PROTEIN	712	796	-	-
	Lele40g0289	860	MobiDBLite	consensus disorder prediction	305	459	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele40g0289	Lele-ChrLele40	2322072	2328299	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele40g0289	519	829	Trihelix Transcription Factor Family	AT5G38560	41.935	2.57e-72	249

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Lele40g0289		PK_Tyr_Ser-Thr	1.2e-22	CL0016