Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0277 ATGAACGTTCGCAACACCAACAACAATAATACCATCATCAACAACAACAACAACAATCAGGCTTGTGCTGCTTGTAAGTTCCAACGTAAGAAGTGTGCTCCTGACTGTATTCTCGCACCTTATTTCCCTTACGATCGACAACGTCAATTCCTCAACGCTCATAAATTGTTCGGTGTTCGTAATATCACCAGAATCATCGAAAACCTCGACCCTCACCATCGGAACGAAGCCATGCGAACCATCATTTATCAATCTGACATGCGAGCCACCGACCCCGTTGGAGGTTGTTATAGGTACATTCACGAACTCGTGGCTCAGATTCAATACCACGAGGCCGAACTTGAGCTTGTTCTTCAACAACTAGCTGTGTTTCGTGCCCAAGCTCATCATCTTCACCATCCTCCTCATCATGACATTGTGGATGCTAACCCGGATCATTTCAGCTTGTATAGCAGCCCTAATATTGCAGCAGTACCATCATCAATTTCTCATTATCATCACATTCAACAACGACAACAAGAGCCGGTGAATATGGTGGTGGTTAAAAAGGATAATGACAGTAATTATAACGATAATAACAAGAATGTTGGGGATGAACACAGTAGTTATGTGGGTGATGAATTGTATAATGATCATCATAAGCTTTCGTCGTCTATCCTCGACATTCATCGTGATGACAGTTTTTGA 687 0.425 MNVRNTNNNNTIINNNNNNQACAACKFQRKKCAPDCILAPYFPYDRQRQFLNAHKLFGVRNITRIIENLDPHHRNEAMRTIIYQSDMRATDPVGGCYRYIHELVAQIQYHEAELELVLQQLAVFRAQAHHLHHPPHHDIVDANPDHFSLYSSPNIAAVPSSISHYHHIQQRQQEPVNMVVVKKDNDSNYNDNNKNVGDEHSSYVGDELYNDHHKLSSSILDIHRDDSF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0277 228 ProSiteProfiles LOB domain profile. 20 121 IPR004883 -
Lele40g0277 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 169 - -
Lele40g0277 228 Pfam Lateral organ boundaries (LOB) domain 21 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0277 Lele-ChrLele40 2210805 2211569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0277 20 152 AS2 family AT3G13850 61.654 1.31e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele40g0277 LOB 2.9e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0984 41 19272500 19273076 Lele40g0277 40 2210805 2211569 CCT
Lele42g0948 42 22199131 22202232 Lele40g0277 40 2210805 2211569 CCT
Lele37g0307 37 2582706 2585918 Lele40g0277 40 2210805 2211569 hybridization
Lele38g0293 38 2309876 2310460 Lele40g0277 40 2210805 2211569 hybridization