Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0266 ATGATGCCCCCTAGTCTTGTCTCCAATCTTCAACAGGCCCTGCACAGCAGGAAAGGAGCCGAACAAGGCGACCAACCAGAAAACGGTGCCGAATCTGCCGAACCTTCTTCTTCTACTTCCGGGCCTGATTCCTCGGAGATCATTGATAGTTCGAAGCCTATTGTCTTGGTCACCAATAGTGAAGGAATTGAGTCCCCTGGCCTTACTTTCCTGGTTGAAGCTCTTGTTCGTGAAGGCCTCTACAATGTTCATATCTGCGTTCCTCAATCGGACAAATCAGCTGCAGGGCACTCTCTAACGTTCAGAGAAACGGTGGAAGCGAGTTCTGCTCAAATTGATGGTGCCACTGCATTTGAGATTTCAGGAACTCCTGTGGATTGTGTTTCTCTAGCGTTATCAGGGGCGTTGTTTTCATGGTCAAAGCCTATGCTGGTTATCAGTGGAATTAATAGGGGGTCAAGCTGTGGTCATCACATGTTCTACTCAGGTGTTGTTGCTGGAGCTAGAGAGGCATTACTTTGTGGTGTACCATCACTGTCAATATCATTGAATTGGAAGAAGGACGGAAGTCAAGAAACAGATTTCAAGGACGCAGTAGCAGTTTGTTTACCGGTTATAAATGCAGCTGTAAGGGATATTGAAAAGGGAACTTTCCCCAAAAGCTGCTTTTTGAATATAGAAATTCCAACATCTCCTCTGGATAACAAGGGTTTCAAATTGACCAAGCAAAGTATGTGGAGATCCACTCTAAATTGGCAAGCCATTTCAAGTAATCGCTACCCTCCTGCTCAGCACATGGCTAATCAACAAGGCCTTGGCATTCAGCTTGCGCAGCTTGGCCGAGATGCCTCTGCTGCTGGTGCAGCTCGTCGATTGACTACACAGAAAAAGAATTTGGAGGTTGTTGAATCAGTTGGAGCTGCGGGAAAGCCTAAGTTCAGTAAAGTGAAGAAATATTTCAGATTAGAGTTTTCAGAAAAGCAGCAGGAAGATCTGGAAGATGATCTGGATTATAGAGCACTTGAAAATGGATTTGTTGCAGTAACCCCACTCTCAATTTCTCCTCATGTTGAATCTGATATCCAAACGGCAGCTTCTGATTGGATCTCTACTGTGATTCCAATTGAACAATGA 1134 0.4497 MMPPSLVSNLQQALHSRKGAEQGDQPENGAESAEPSSSTSGPDSSEIIDSSKPIVLVTNSEGIESPGLTFLVEALVREGLYNVHICVPQSDKSAAGHSLTFRETVEASSAQIDGATAFEISGTPVDCVSLALSGALFSWSKPMLVISGINRGSSCGHHMFYSGVVAGAREALLCGVPSLSISLNWKKDGSQETDFKDAVAVCLPVINAAVRDIEKGTFPKSCFLNIEIPTSPLDNKGFKLTKQSMWRSTLNWQAISSNRYPPAQHMANQQGLGIQLAQLGRDASAAGAARRLTTQKKNLEVVESVGAAGKPKFSKVKKYFRLEFSEKQQEDLEDDLDYRALENGFVAVTPLSISPHVESDIQTAASDWISTVIPIEQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0266 377 Pfam Survival protein SurE 55 247 IPR002828 GO:0016787
Lele40g0266 377 SUPERFAMILY SurE-like 54 363 IPR036523 GO:0016787
Lele40g0266 377 MobiDBLite consensus disorder prediction 1 49 - -
Lele40g0266 377 MobiDBLite consensus disorder prediction 1 18 - -
Lele40g0266 377 Hamap 5'/3'-nucleotidase SurE [surE]. 53 373 IPR030048 GO:0008252
Lele40g0266 377 MobiDBLite consensus disorder prediction 29 49 - -
Lele40g0266 377 PANTHER 5'-NUCLEOTIDASE SURE 49 372 IPR030048 GO:0008252
Lele40g0266 377 Gene3D - 44 370 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0266 Lele-ChrLele40 2124915 2128358 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0297 37 2509724 2526431 Lele40g0266 40 2124915 2128358 hybridization
Lele38g0280 38 2242708 2246480 Lele40g0266 40 2124915 2128358 hybridization