Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0264 ATGTACTATAGAATAAGTGAGGAAAGAATAAAGATTAAGCTAACTGCAGGAATCATGGGTCATCACTCTTGCTGTAACAAGCAGAAGGTGAAAAGAGGATTATGGTCTCCTGAAGAAGACGAGAAGCTCATCAACCACATCACCACTTATGGCCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCAGGACTTCAGAGATGTGGAAAAAGTTGCAGATTGAGATGGATAAATTATCTGAGACCTGATCTGAAAAGAGGAAGCTTTTCTCCTCAAGAAGCAGCTCTCATTATTGAACTCCATAGCATTCTGGGCAACAGGTGGGCTCAGATTGCAAAGCACCTACCTGGAAGAACAGACAACGAGGTGAAGAACTTTTGGAATTCAAGCGTCAAGAAGAAGCTTCTTTCTCGTCATGATCATCTTCTTCTTCCTCCTTTAACCACTTACAATGGTACTTCTGTGGAAAGCTTCTTCCCTCTTACTCCAAACCCTAAGAACCCTAACATGATCCAAACCTCTCACCATAATCATCACCAACACCAGCTGTTCCTTCCCACTTGTTCATCACTTATTCAAGGTTTTCATCAATTTGATCATCATGAAGCTTCTGAAGATCTTAAGATAGGAAATCTCCTTCATGTTCAGAATCCTAATAATTTGCAGGAAATTACACCATCCAATAGTAGTATTAATCCATCTTCTTATGAAGATACTAATTGGTCACTGGTAAATCAAGAACATACCAATCTGTTATCCCCACATTACATTGTTCAGAAATTCATGAACCCAACAAGTTCAACTTTGCAGCAGCATCATAAGAGTCAACCTGTGGATCCTCATATTGAACAGAAAATGTTCCAGAGTACTATTGAGGATTATAATGTTTGTGGAGTCCCGTATTCATCTATATCTTCTGCTTCACAAGAACAAGACCCTCTTGTTGCAAGATTTATTCATCAGAGCTATCCATCTTCTGGTTTTGGTTACCCACAAGATCATCAAAGTCAAATGGCTGACGTGGCAGCCAATCACATGGAGTTCATAGATGTCATCATGTCCTCGTTGCCATTATCATCTTCAGCGTCCTCGTCATCATCGTCATCATCAAACAATCAAGTTGTCACAAATACCCCAAATTTTCCTTCATGCTGGGAGCCATGA 1161 0.404 MYYRISEERIKIKLTAGIMGHHSCCNKQKVKRGLWSPEEDEKLINHITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSVKKKLLSRHDHLLLPPLTTYNGTSVESFFPLTPNPKNPNMIQTSHHNHHQHQLFLPTCSSLIQGFHQFDHHEASEDLKIGNLLHVQNPNNLQEITPSNSSINPSSYEDTNWSLVNQEHTNLLSPHYIVQKFMNPTSSTLQQHHKSQPVDPHIEQKMFQSTIEDYNVCGVPYSSISSASQEQDPLVARFIHQSYPSSGFGYPQDHQSQMADVAANHMEFIDVIMSSLPLSSSASSSSSSSSNNQVVTNTPNFPSCWEP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0264 386 FunFam Myb transcription factor 87 134 - -
Lele40g0264 386 FunFam MYB transcription factor 24 84 - -
Lele40g0264 386 MobiDBLite consensus disorder prediction 359 386 - -
Lele40g0264 386 CDD SANT 87 127 IPR001005 -
Lele40g0264 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Lele40g0264 386 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Lele40g0264 386 SUPERFAMILY Homeodomain-like 29 126 IPR009057 -
Lele40g0264 386 SMART sant 31 81 IPR001005 -
Lele40g0264 386 SMART sant 84 132 IPR001005 -
Lele40g0264 386 Gene3D - 87 134 - -
Lele40g0264 386 Gene3D - 29 85 - -
Lele40g0264 386 Pfam Myb-like DNA-binding domain 85 127 IPR001005 -
Lele40g0264 386 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Lele40g0264 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 79 IPR017930 -
Lele40g0264 386 PANTHER MYB DOMAIN PROTEIN 55 19 353 - -
Lele40g0264 386 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Lele40g0264 386 CDD SANT 35 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0264 Lele-ChrLele40 2116355 2118064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0264 19 136 MYB Transcription Factor Family AT3G13890 94.915 3.53e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele40g0264 Myb_DNA-binding 5.8e-14 CL0123