Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0263 ATGGTTCAATTATGGTTGGATGATGGCGATGGCAAAGATTTAGATCTGGAGAAGTGCCCAAGAAGTAAATTACAAAACGAGTGCATCCACTACTGTAAACCTTGGATATTTGTACTGAGCACTTCAAGAACTTTGTACATTGCAGAGAAGAAGAAAGGGTTCTTTCATCACTCCAGTTTTCTTGCTGGTGGTGCCACCGTTGCTTCTGGCAGATTGGTTGCTTCCCATGGACTCCTTCATGTGCGCGATATGGCCTATAGTGGTCATTATTGTCCAACATCGATTCATTTTCAGTTGTTTATTGCCTTCTTGGAAAATCATAACGTGGACTTGACAAATGTGAAGAAACATGCAGTGAATGATGATGTGCCACCATCAAAACCAGTTGTGGACGGCGAAGAATTATTACAGTTTGATTGCAGAGCTGATAATAACGTTAATGCTTGTCAAAGAGAAGAAGCCATTGTGGAATCATCATCTTCACAGGTGAAAGAGAATGATGGTTATCAGTACCCTGTATCAATAAAAGTGCCAGTTGAAGAATTTGAAACGCTGCATATATCAGCTAGGGTTAATGTTAGCCATGGAAAACTTTGCAGAAAAGCTTCTATACCTATAATACCTTCTCATCCAAAACTCCATTTATCATCTTCCCCTGATAAGATCGGGCGTAGGGAGCAATATCCCACTCCAAGGCTACGTGTTCCTCTATATGTTTTTGAATCAAGACTACATGTGAGAAGATGGTTCAAATCCCTCATTTCTCATAAAAAGCCCTCCTCAAATGATCCTGAGAAGGTTGGCGATAAGAGTAAGAAGAAATGGAGGCTGTGGAGAAGCTCTTCAGAAGGTTTTGCATTTGGGTCCTCCACGAAAAGCATGAAGAAGTTACGCGATGCTGCATCAGAGAGGTCTGATTCATCTACGTTTGAGGTGGATGATTCACTTGCTTCTGCCATGGCTACTGTGGCAGTCCGAGCTGCTCCTAAGGATTTCATGCTAATTAAGCAGGAATGGTCTGCGACTCGCATTCAATCTGTGTTTCGAGGCTTCTTAGAAGGATGGTGTTACATTCCAGGAACTGTAGAGGTAGTTAAAGCAAAGATACAAATGAAGCAAGAGGCAGTCATCAAAAGGGAGAGAGCAATGGCTTATTCTCTCTCTGCTCAGTCACGAGTGAGTGGTAGTCCCAATTCAAGAGGAACAAAGACAGTGAACAAGAGCTCGTTGTTAGAGCAACGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGAAGAAGGTACCTATTATGACTCACCTGACATCACTCCTCCATTGTTATTGTTGTCCAGGAAAAGCAATGAACTTGTTCAAGAACAACAACAAGGCTTAATCAAAGCAAGAAAGAGTGTTGTGAACACAACTATTTCCAATAGGTCTCCTACAACAACGAGTCAATCCACTCTCACATCATCGTCTTCAACCTTGAGTTCTGAATGCTGCACATTTGATGATAGCCCTGAATCGTCAACTTCATTCACGTACATATCACAATCTGTGCCATTTAGCAGCATTACTATTGGGGAGGAAACAAGAGAGGAAAGGAGTGTTCATAGACCTAGCTATATGAATCTGACAGAGTCAACAAAGGCCAAACAAAGAGCTTGTGGTTATATGATGAATCTGAGTGGAGATTGTAGAAGCACTTGTTCTGGTTCTGATTCTTGTTTTAATTTGTGGAAAGGTGCATGTGCAACACCTGAAAGGTTGTCTTACCAAAAGAGAAACTCTGGGAGACAACAAAGGTTGGCTTGA 1797 0.4196 MVQLWLDDGDGKDLDLEKCPRSKLQNECIHYCKPWIFVLSTSRTLYIAEKKKGFFHHSSFLAGGATVASGRLVASHGLLHVRDMAYSGHYCPTSIHFQLFIAFLENHNVDLTNVKKHAVNDDVPPSKPVVDGEELLQFDCRADNNVNACQREEAIVESSSSQVKENDGYQYPVSIKVPVEEFETLHISARVNVSHGKLCRKASIPIIPSHPKLHLSSSPDKIGRREQYPTPRLRVPLYVFESRLHVRRWFKSLISHKKPSSNDPEKVGDKSKKKWRLWRSSSEGFAFGSSTKSMKKLRDAASERSDSSTFEVDDSLASAMATVAVRAAPKDFMLIKQEWSATRIQSVFRGFLEGWCYIPGTVEVVKAKIQMKQEAVIKRERAMAYSLSAQSRVSGSPNSRGTKTVNKSSLLEQRMTVKPWESRLMEEGTYYDSPDITPPLLLLSRKSNELVQEQQQGLIKARKSVVNTTISNRSPTTTSQSTLTSSSSTLSSECCTFDDSPESSTSFTYISQSVPFSSITIGEETREERSVHRPSYMNLTESTKAKQRACGYMMNLSGDCRSTCSGSDSCFNLWKGACATPERLSYQKRNSGRQQRLA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0263 598 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 5 34 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0263 Lele-ChrLele40 2096905 2103857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0263 249 574 IQD Protein Family AT1G17480 29.471 1.28e-21 95.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0263 40 2096905 2103857 Lele41g0972 41 19186723 19190421 CCT
Lele40g0263 40 2096905 2103857 Lele42g0941 42 22128535 22132420 CCT
Lele40g0263 40 2096905 2103857 Lele43g0424 43 3736594 3740295 CCT
Lele40g0263 40 2096905 2103857 Lele44g0416 44 3071895 3075862 CCT
Lele37g0294 37 2482981 2485162 Lele40g0263 40 2096905 2103857 hybridization
Lele38g0277 38 2201820 2203780 Lele40g0263 40 2096905 2103857 hybridization