Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0257 ATGTATGTATTCTCTATAGAAGGAATCCGAAATCAGAATAGCTCTTTCCATATACAAGCAAACTTCCACGTACTACCAGGTTTGGCACCAGAAGGAACTCAATTTGATGCTCGTCAATATGATGCTAAGATGACTGAATGGCTTTCCACTGAGGGACAAGAATTCTTCACCTCATATGACGAAGTTTATGAAACTTTTGATGCCATGGGGTTACAAGAAAATCTTTTAAGAGGCATTTATGCTTATGGCTTTGGTTTTGGCACCAACAAGGGAGCTGCCACAGCAAATAGAGTTATGAGAGCTCTTGGTGATTACCTTGGTGTGAGAGTTCATGCTTGTGTTGGGAGAACAAGTGTACGTCAAGATCAACGAATTCTCCAATCTGGTGTTCATGTTGTTGTTGGTACTCCTGGTCGTGTGTTTGACGTGCTCCGAAGGAAGTCTCTTCGCTTAGACCACATAAAGATGTTTGTCTTATATGAAGATGATGAAATGCTTTCACGTGGTTTCAAGGACCAGATCTATGACATATTCCAGCTACTTCCTGAGAAAATTCAGGTTGGGGTTTTCTCTGCTACAATGCCACAAGAGGCCCTTGATATTACAAACGAGTTCATGGATAAACCAGTGAGCATCTTGATGAAGCGTGATGAACTGACCCTTGAATGTATCAAGCAGTTTTATGTCAATGTTGAGAAAGATTGGAAGTTAGAAACATTATGTGATCTTTACGAAACACTTGCTACCACAAAGGCTACACATGGTGACATGGATCAAAACACTAGAGACACCATCCTGCGCGAGTTCCGGTCTGGTTCTTCGCGAGTTTTGATCACAACCGATCTCTTGGCTCGAGATATTCAAACCATGGAATTCAGATCCAGATCATGCAGAGATGATGAAAGTGGCAAAACAGGAGGAAGGGGAATCCCAGGAAACATGCAAGATCTGAGGAGTTACAGTGCGAATTATAGTAATCAGAAGGAGGGTAAGATGAAGAAAGCGAAGAAAGCTTCAAAAAGTTGGAGTCTCAGTGACCCAGAAATACAGAGGAAGAAGAGAGTTGCTAGCTACAGAGTATATGACATGGAAGGGAAAATGAAAGGATCTCTGAGGAAGAGCTTCAGGTGGATCAAGAACTCGTACACCCATGTGATCTATGGATGGTGGTGA 1173 0.422 MYVFSIEGIRNQNSSFHIQANFHVLPGLAPEGTQFDARQYDAKMTEWLSTEGQEFFTSYDEVYETFDAMGLQENLLRGIYAYGFGFGTNKGAATANRVMRALGDYLGVRVHACVGRTSVRQDQRILQSGVHVVVGTPGRVFDVLRRKSLRLDHIKMFVLYEDDEMLSRGFKDQIYDIFQLLPEKIQVGVFSATMPQEALDITNEFMDKPVSILMKRDELTLECIKQFYVNVEKDWKLETLCDLYETLATTKATHGDMDQNTRDTILREFRSGSSRVLITTDLLARDIQTMEFRSRSCRDDESGKTGGRGIPGNMQDLRSYSANYSNQKEGKMKKAKKASKSWSLSDPEIQRKKRVASYRVYDMEGKMKGSLRKSFRWIKNSYTHVIYGWW 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0257 390 Pfam Domain of unknown function (DUF3511) 345 388 IPR021899 -
Lele40g0257 390 Gene3D - 221 293 IPR027417 -
Lele40g0257 390 Gene3D - 88 220 IPR027417 -
Lele40g0257 390 Pfam Helicase conserved C-terminal domain 248 285 IPR001650 -
Lele40g0257 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 214 IPR027417 -
Lele40g0257 390 Pfam DEAD/DEAH box helicase 98 198 IPR011545 GO:0003676|GO:0005524
Lele40g0257 390 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 212 IPR014001 -
Lele40g0257 390 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 96 288 - -
Lele40g0257 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 285 IPR027417 -
Lele40g0257 390 MobiDBLite consensus disorder prediction 327 346 - -
Lele40g0257 390 SMART ultradead3 45 227 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0257 Lele-ChrLele40 2040816 2047039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0257 25 287 Eukaryotic Initiation Factors Gene Family AT3G13920 62.791 2.58e-133 386