Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0252 ATGGAAGACACATCGTCTGCTGGGGGAAATTCACAAGGGGATAAAGTGCATAATCTTCCTTCTGATACCTCAGATTCTAAAGATACAAACAGGTTTAGCACTGTTATCATAGCAAATGCTGTCATCTTCATAGTTTTCAAGCCTCTCAGATGCCTTTTACCTGTCAGTCTTGATAAGGAATATACTGGTAAAAACAACTACACCGGTGAAGAGGCAATGAAGAGTGGGCAAGCGGACCGGCTCCCGCCACACCGCCCTACCAGCTCGATATTTTCCCGCAAACCAATACGGAACTTTCTCTGTCCCTGTTCCGCTGTTCGCCCCTTCCTTCTCTTTATTGCACCCAACCCTAGCCCTAATCACCTGGAAGCCACTCCAATGGCGTACCATTCCCCTGATAGCGAATCAGGATCCGACCCGCAAGCCCCAACGCGCCTCTATAATCCTTATAAGGACCTCGAAGTCTCCATTCGAAACTTATACCAGCTTCCAACGTCACCTGAGTATCTCTTCGTCGAGGAGGCTCGCCGTAAGCGTCGATCCTGGGGTGAAAATCTCACCTTTTACACCGGCTGCGGCTACCTTGCGGGCTCCGTTGGTGGGGCCGGCGTTGGCCTGGTCGATGGCGTGAAATCTTTTGAATCTGGCGACACCACCAAGCTCCGAATAAACAGGGTGCTTAATGCTTCTGGCCATTCGGGTCGGTCTTGGGGTAACCGAATTGGTGTTCTTGGATTGTTATATGCCGGTATAGAGAGCGGGATAGGGGCCGTGAGGGACAGTGATGATGTGTGGAATAGTGTGGCAGCGGGGCTCGGTACTGGCGCGTTGTATCGTGCTGCGAGAGGGGTGAGATCAGCTGCGGTGGCGGGAGCGGTCGGCGGAGTTCTAGTCGGTGTGGCCGTAACCGGCAAGCAGGCCTTGAAACGATACGTGCCAATTTGA 945 0.5259 MEDTSSAGGNSQGDKVHNLPSDTSDSKDTNRFSTVIIANAVIFIVFKPLRCLLPVSLDKEYTGKNNYTGEEAMKSGQADRLPPHRPTSSIFSRKPIRNFLCPCSAVRPFLLFIAPNPSPNHLEATPMAYHSPDSESGSDPQAPTRLYNPYKDLEVSIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGSVGGAGVGLVDGVKSFESGDTTKLRINRVLNASGHSGRSWGNRIGVLGLLYAGIESGIGAVRDSDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGVAVTGKQALKRYVPI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0252 314 MobiDBLite consensus disorder prediction 123 142 - -
Lele40g0252 314 PANTHER TIM23 158 302 IPR045238 GO:0022857
Lele40g0252 314 Pfam Tim17/Tim22/Tim23/Pmp24 family 188 297 - -
Lele40g0252 314 MobiDBLite consensus disorder prediction 1 28 - -
Lele40g0252 314 MobiDBLite consensus disorder prediction 63 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0252 Lele-ChrLele40 2004828 2007379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0252 134 314 Chloroplast and Mitochondria Gene Families AT1G72750 70.652 9.15e-78 234
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1016 41 19462932 19470163 Lele40g0252 40 2004828 2007379 CCT
Lele42g0984 42 22462632 22468743 Lele40g0252 40 2004828 2007379 CCT
Lele38g0265 38 2135997 2136728 Lele40g0252 40 2004828 2007379 hybridization