Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0226 ATGGGAAGGAGCCCTTGCTGTTCCAACGAAGGTTTGAACAGAGGAGCATGGACAGCTGCTGAAGACAAGATTCTCATTGAATACATCAAGCTTCATGGTGAAGGAAACTGGCGACAACTTCCCAACAAAGCAGGTTTTGTGACTGATAAATATCTGAATCAGTTTTATTATGATGTGTGTGAATTCATTTATTTGGAATGGTTGTGCAGGTGGTCTTTGATAGCTGGGCGACTACCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAACATCGGAAAGAAGCTTCGATATGGTAACTCGAAATTCGTTGAACTTGGATCCTCAAGTTTACCCGGGATAGACTCCGACCCGGATCCATATCAGCTTGACCTAATAAAACCCACACCAAAAACCACTGGTTCATGCCTGATTCGAACCAAAGCAACAAGGATTTATGTCCTGGCTTGGTTAATTATATTATACTTCTCTCTTCTTCTATCCCATTTGCTGAGTGCATATATAGTTGAATTTCTCAAAGTGAATGCTGGTTACTTATATATACATAAAGGAAATGCTGATAATTGA 573 0.3997 MGRSPCCSNEGLNRGAWTAAEDKILIEYIKLHGEGNWRQLPNKAGFVTDKYLNQFYYDVCEFIYLEWLCRWSLIAGRLPGRTDNEIKNYWNTNIGKKLRYGNSKFVELGSSSLPGIDSDPDPYQLDLIKPTPKTTGSCLIRTKATRIYVLAWLIILYFSLLLSHLLSAYIVEFLKVNAGYLYIHKGNADN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0226 190 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 46 - -
Lele40g0226 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 98 IPR017930 -
Lele40g0226 190 ProSiteProfiles Myb-like domain profile. 9 94 IPR001005 -
Lele40g0226 190 CDD SANT 16 94 IPR001005 -
Lele40g0226 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 48 IPR017930 -
Lele40g0226 190 SUPERFAMILY Homeodomain-like 14 92 IPR009057 -
Lele40g0226 190 Gene3D - 16 94 - -
Lele40g0226 190 Pfam Myb-like DNA-binding domain 14 44 IPR001005 -
Lele40g0226 190 Pfam Myb-like DNA-binding domain 70 92 IPR001005 -
Lele40g0226 190 SMART sant 13 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0226 Lele-ChrLele40 1767447 1769059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0226 1 98 MYB Transcription Factor Family AT2G16720 51.724 3.02e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele40g0226 Myb_DNA-binding 1.4e-06 CL0123