Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele40g0225 | ATGGCTTGTAGGAGAGATGATAATAAGAGCGAAGAAGTGAAGTCATCAAATGAAAGTATGAAGAACGTAGCTGTGAGCAAGGGAACTTGGACAGAAGAGGAAGATAGGAAACTGGCTGAGGTTATTTCAGTTCATGGGGCCAAGAAGTGGAAGTCCATAGCTGCCAAAACGGGCCTTAATCGTGGTGGTACGAGTTGTAGGCTGAGATGGTTGAACTATCTTAGACCCAACATCAAGAGAGGAAACATATCAGAACAAGAAGAGGATTTGATACTTCGACTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATTGCCGGAAGGCTTCCTGGAAGAACAGACAATGAGATAAAGAACTATTGGAATTTTCACTTGTGCAAGAAGATAAAAAAACAGAGGGATGAGCAGCAATCAAGTGGTGGAAGTTCAACAAGACAAGAAGAAAAACAAAGACTTGTGTTGGAGGAAGCAGTTCCTGGTGAGAATTCTAAAGTGCGAGCTGATGAAGACACATCAAATAATAAAGAACCCATCAATTTTGATCATGTGGATTATGGCTTCTTTGACATGTCCAATAATAATGAAGAAGGTCAATTGAATCTGGAGTGGTGGGTTAATCAATTCCATGAACTAGATGAGGCCACTCTTGGACTCTTCTCATAA | 663 | 0.4072 | MACRRDDNKSEEVKSSNESMKNVAVSKGTWTEEEDRKLAEVISVHGAKKWKSIAAKTGLNRGGTSCRLRWLNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNFHLCKKIKKQRDEQQSSGGSSTRQEEKQRLVLEEAVPGENSKVRADEDTSNNKEPINFDHVDYGFFDMSNNNEEGQLNLEWWVNQFHELDEATLGLFS | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele40g0225 | 220 | ProSiteProfiles | Myb-like domain profile. | 22 | 74 | IPR001005 | - | |
| Lele40g0225 | 220 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Lele40g0225 | 220 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 22 | 78 | IPR017930 | - | |
| Lele40g0225 | 220 | ProSiteProfiles | Myb-like domain profile. | 75 | 125 | IPR001005 | - | |
| Lele40g0225 | 220 | SUPERFAMILY | Homeodomain-like | 26 | 121 | IPR009057 | - | |
| Lele40g0225 | 220 | CDD | SANT | 84 | 125 | IPR001005 | - | |
| Lele40g0225 | 220 | MobiDBLite | consensus disorder prediction | 132 | 178 | - | - | |
| Lele40g0225 | 220 | Gene3D | - | 82 | 155 | - | - | |
| Lele40g0225 | 220 | Gene3D | - | 27 | 79 | - | - | |
| Lele40g0225 | 220 | CDD | SANT | 29 | 74 | IPR001005 | - | |
| Lele40g0225 | 220 | MobiDBLite | consensus disorder prediction | 148 | 177 | - | - | |
| Lele40g0225 | 220 | SMART | sant | 26 | 76 | IPR001005 | - | |
| Lele40g0225 | 220 | SMART | sant | 79 | 127 | IPR001005 | - | |
| Lele40g0225 | 220 | FunFam | MYB-related transcription factor | 26 | 79 | - | - | |
| Lele40g0225 | 220 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Lele40g0225 | 220 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 19 | 161 | - | - | |
| Lele40g0225 | 220 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 79 | 129 | IPR017930 | - | |
| Lele40g0225 | 220 | Pfam | Myb-like DNA-binding domain | 80 | 124 | IPR001005 | - | |
| Lele40g0225 | 220 | Pfam | Myb-like DNA-binding domain | 27 | 74 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele40g0225 | Lele-ChrLele40 | 1757565 | 1758403 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele40g0225 | 1 | 155 | MYB Transcription Factor Family | AT5G52600 | 51.613 | 8.44e-50 | 159 |
Transcription factors information