Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0221 ATGATTACTAGTGAAACAAGTAGTGTAAGAAATAGATCTCCTTTCACAGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTATCTTTAAATACCTGATCTCAGGCAGCCCCATCCCACCTGATCTCATTTACTCTGTCAAAAGAAGCCTGGAATCTTCACTGTCTTCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCTATTGGATGGGGGTGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTACCTTGACTCAAAATACTGTGAGAGGCACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAACAGCAGCAGCAACTGCAACTGGCATTTCAACAAACACTGCACAGCCAATCTCTTCACCATATAGTAACAGTAACAGAGGCCTTAGCATGAGCAATCCTCCCAATCCACCCTCAACAACTTCTTCTTTCCCTTTCTCTCTATTGCCCTCTGATTCCCAACCTTATTCCCATATCTACCAGAATTCTTCTCTTAATCCCTTGTTCTACACCCATTCAACCTCATGTAGAACTCCTGATTCTGATTTCCCCCCTCAAAAAAGCAATACCCACCAGCTATTTTTAGACTCTGGATCTTATTCTAGGGATGAGGACTATAGGCATATTCATGGAATGAGGGAAGGAGTTGATGAGAGAGCTTTCTTCCCAGAAGCTTCAGGGAGTATTAGGAACTTTCCTGATTTCTCCCAGTTCCTGAACATGAATGATAATACAACTCCAACTAGACAACAAGAAGAGCAACATTGCTTTGTTCTGGAAAGAGACTTCAAATCAGCAGGACAAATAAAACATGGGAATGAAAGTGAGATGAACCAGAGATCATCACTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCATGGCTTGATCTTGCTTCAAATTCCAGAATCCCCTCTGGTGTCATGTCCTGTGTGTACATAATCTCCTTGACTGATAAAGAATACAGTCAACATGAAAAGAACACTATTTCCCCTGTTTTTGAAAGAACCATCATCGTTCCATGGTGCTTGCTTATGCCAACTTTACCAGTTTGA 1146 0.4206 MITSETSSVRNRSPFTAIQWQELEQQALIFKYLISGSPIPPDLIYSVKRSLESSLSSSSSRLFPFHPIGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYLDSKYCERHMHRGKNRSRKPVEISSTAAATATGISTNTAQPISSPYSNSNRGLSMSNPPNPPSTTSSFPFSLLPSDSQPYSHIYQNSSLNPLFYTHSTSCRTPDSDFPPQKSNTHQLFLDSGSYSRDEDYRHIHGMREGVDERAFFPEASGSIRNFPDFSQFLNMNDNTTPTRQQEEQHCFVLERDFKSAGQIKHGNESEMNQRSSLHHFFGEWPPKNTDSWLDLASNSRIPSGVMSCVYIISLTDKEYSQHEKNTISPVFERTIIVPWCLLMPTLPV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0221 381 MobiDBLite consensus disorder prediction 123 174 - -
Lele40g0221 381 ProSiteProfiles WRC domain profile. 82 126 IPR014977 -
Lele40g0221 381 PANTHER GROWTH-REGULATING FACTOR 5 13 326 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele40g0221 381 MobiDBLite consensus disorder prediction 114 174 - -
Lele40g0221 381 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele40g0221 381 Pfam WRC 83 125 IPR014977 -
Lele40g0221 381 Pfam QLQ 14 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele40g0221 381 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0221 Lele-ChrLele40 1719277 1721818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0221 1 260 GRF Transcription Factor Family AT3G13960 42.373 9.84e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele40g0221 WRC 4.4e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0221 40 1719277 1721818 Lele40g0221 40 1719277 1721818 ECH
Lele37g0234 37 1821249 1822603 Lele40g0221 40 1719277 1721818 hybridization
Lele38g0234 38 1841431 1843016 Lele40g0221 40 1719277 1721818 hybridization