Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0217 ATGCCCTGCAAAAGATTTCTACTTGGCTGTCTCAAGGCCAAGAATAATAAGCCATCCTCTGATCCATCTCTAGTCTCCAAGAAGACACCTTCAAGGAGACTTTCCCTCTCTGATTTGAGCAATGCTTCTTCAATCTCTATCATGAGTGATTTGTCCAACTCTGTTCTCGGATCAAATCTGCAAGTTTTCACCTTCAAGGAGCTTCAAGAGATCACTAACAACTTCAGCAGAAGCAGTGTTCTTGGAGAAGGTGGATTCGGCAAGGTGTATAAAGGCTTCATTGATGACAAGCTTAGGCCTGGATTATTAAAAGCTCAAGTCGTGGCAGTTAAGGTTTTAGACTTAGATGGGAAACAAGGCCATAGGGAGTGGTTGGCAGAAGTAATAATTCTGGGGCAACTGAAGCATCCCAATCTGGTGAACCTAATTGGGTATTGCTGTAAAGATGAGAACAGGCTACTGGTATACGAATACATGGAAAGGGGCAATTTAGATGACAAGCTTTTCAAAGGCTCTTTAGCAGCGTTGAAATGGTTAACAAGAATCAAAATAGCAATTGGGGCAGCAAAAGACGGTCCAGATGAAGATCAGAGCCACATCACAACTCGAGTTATGGGAACCCACGGCTATGCTGCTCCTGAGTATCTTATGACAGAATGGGCGAGACCACTTCTGAAAGATACCTTGAAACTGGAAAGAATAATGGATCCAAGACTTGAGGGACAATACTCCATTGAAGGAGCTAGAAAGGTGGCTGCTTTGGTTCACCGATGTCTGAGTCATCAGGCCAAGACTCGGCCATCAATGCGAACCGTGGTCAAGTCATTAGAATCTATCATGAACCTGACCGACATTCCACTGAGCCACTTTGTCTATGTGGTTCCTAAAGAGGGTGAAATGGAAGGTCGGGTTCAGAGTAAAGTTGAAAATGGAGGGAAGAACGAGAACAGAGAGGAGAAGGTGGAGACGAAGGAGAAGGGCCGGCCGAGGAATCGGAAAAATCGAAGACGTAAAGGACAGATTAGACCACTCAAGTCTCGTGCCGTTTACACTGATACGACATTGTATAAATCTCTTGGTACTAATTTGTATAATAATAAAATTAGTGTAATAAATTGA 1119 0.4352 MPCKRFLLGCLKAKNNKPSSDPSLVSKKTPSRRLSLSDLSNASSISIMSDLSNSVLGSNLQVFTFKELQEITNNFSRSSVLGEGGFGKVYKGFIDDKLRPGLLKAQVVAVKVLDLDGKQGHREWLAEVIILGQLKHPNLVNLIGYCCKDENRLLVYEYMERGNLDDKLFKGSLAALKWLTRIKIAIGAAKDGPDEDQSHITTRVMGTHGYAAPEYLMTEWARPLLKDTLKLERIMDPRLEGQYSIEGARKVAALVHRCLSHQAKTRPSMRTVVKSLESIMNLTDIPLSHFVYVVPKEGEMEGRVQSKVENGGKNENREEKVETKEKGRPRNRKNRRRKGQIRPLKSRAVYTDTTLYKSLGTNLYNNKISVIN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0217 372 Pfam Protein tyrosine and serine/threonine kinase 78 189 IPR001245 GO:0004672|GO:0006468
Lele40g0217 372 MobiDBLite consensus disorder prediction 301 346 - -
Lele40g0217 372 PANTHER OS01G0588500 PROTEIN-RELATED 218 279 - -
Lele40g0217 372 ProSitePatterns Protein kinases ATP-binding region signature. 81 111 IPR017441 GO:0005524
Lele40g0217 372 MobiDBLite consensus disorder prediction 301 328 - -
Lele40g0217 372 MobiDBLite consensus disorder prediction 329 343 - -
Lele40g0217 372 Gene3D Transferase(Phosphotransferase) domain 1 216 286 - -
Lele40g0217 372 SUPERFAMILY Protein kinase-like (PK-like) 46 276 IPR011009 -
Lele40g0217 372 ProSiteProfiles Protein kinase domain profile. 75 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0217 372 Gene3D Transferase(Phosphotransferase) domain 1 56 191 - -
Lele40g0217 372 FunFam Serine/threonine-protein kinase BIK1 41 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0217 Lele-ChrLele40 1698394 1700121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0217 61 321 Glycoside Hydrolase AT3G07070 32.845 8.92e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele40g0217 PK_Tyr_Ser-Thr 6.5e-18 CL0016