LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele40g0207	ATGGCCGTAGCTCCGGCAATCTTCCGGCCAACTCTCCTCTTTTTCTCCACCTTCTTCATGGTTTTTCGATTGGTGAATTCAATGTCAGAAGCTCAAGCTTTGGTTAATTTTAAAGCCTCATTCTCACATTCTCAAGCACTGAAAGATTGGGTAGTTAACTCTGTTCCTTGCAAAGAAGGGGAAGAATGGGAAGGGGTTATCTGCAACGGTGGATTCATCTCTGGCATTCGATTAGAAGGAATGGGGTTGTCAGGGAAGATCGATATCAATCCATTGCTGGAGCTCAAGGGTCTTCGAATTTTCAGCATTTTGAACAATTCTTTTTCAGGTACAATTCCGGAAATAAATAGAATAGGTTTCTTGAGAGCTCTGTACTTGTCCGGAAATCAATTTTCCGGCGAGATTCCTTCGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTTAACGACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCTACTCCTCGAGCTACGCCTTGAGAACAATCAGTTTAGCGGTAGCCTCCCGAATCTGAGCAAAACACTGTTGATAGAATTCAATGTGTCCAACAATAAATTGGAAGGCGAAATCCCATCGAGCTTATCAAAATTTAGCGCGAGCTCATTTTCCGAGAACCCGAGCCTCTGTGGTGAGAAATTAAACAAACCGTGTCAAAATTCAGTTGAACCGCCAAAACCCATGGAAAATACGGAACAAGGACAAAATAAAGACAGCATCACATCTGATTCAAACTCTAGCAGTAAGAGTAGCAACACCGTGAAGATTGCCGCCATTGTTGTTGCATCAATTGTAGTACTTCTCGCACTTCTCGCTCTACTCTTTGTTCGATCAAGGCAAAAGAAGAAGGAGAAGGGAATACTGGGTTCAGTCCGATCAGAGAACAACAGCGAAGAATCCTCAGCATCAGTGGAAGTTCAGGTTGCTGCACCAGAGAAGAAAGAAGAGGCAGGTATATCCAAAAAATCAAGTCGTAATGGTTCCAGCAGAAGGGGTAAGAGTGGAGGAGGCAATTGTGGTGTTGGAGATCTAGTGATGGTAAATAGTGAAAGTGGTGTGTTCGGGATGCTAGATTTGATGAAGGCAGCAGCAGAAGTTTTGGGGGGTGGAGGGTTTGGGTCATCCTATAAAGCAGTGATGGCTGATGGGGTTGCAGTGGTGGTGAAGAGGATGAGGGAGATGAATGTGTTGACGAAAGATGGGTTTGATGCAGAGATGAGGAAGCTAGGGAGTTTCAGACACAGGAATATCTTAACCCCTTTGGCTTATCATTATAGGAAGGATGAGAAGTTGGTGGTGTCTGAGTTTGTTCCTAAAGGGAGTCTGCAATATTTGCTGCATGGTGATCGTGGACCATCCCATGCTGACCTGGACTGGCCTACTGTTTTAAAAATTGTACGAGGGATTGTTGAAGGGATGATTTATCTTTATACACAGCTTGCTTCATCTGTTTTACCTCATGGTAATCTCAAGTCTAGCAATATTCTCCTTGGTCCCGATTATGAGCCAATGCTAGTTGATTTTGGTTTATGCTCTTTGATCAACCCTTCTAATCTAAGCCAAGCCCTATTTGCTTACAAGACTCCTGAAGCATCACAGAAAGGCCAAGTTTCTCCAAAATCTGATGTTTATTGTCTTGGAGTTGTCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCCCAATATCTCAACAACAACGGTGGAATTGATGTCGTTCAATGGGCTAACTCAGCAATATCTGAAGGAAGGATATTAGAGATGCTTGATCGACAACTTGCAAGCTCTAAAAGTTCTATTGGTCAAATGGAAAGACTCCTCCATGTTGGTTTTGCTTGTACCGCAGGTAACCCCGAGCAACGACCAGACATGGCAGAAGTGTTAAGAAGGATAGAGGAAATACAAAATCAAGGTACCCAAGAATCAGGCTCAAAAGGTCAAGATGAGTGGTCCCAGAGAAGTTTTGGATCAAGCAGCGTTGGAAGCCAATCGGGTCACCATAGTCTTGATTTTGCCATTTCCTAA	2058	0.4359	MAVAPAIFRPTLLFFSTFFMVFRLVNSMSEAQALVNFKASFSHSQALKDWVVNSVPCKEGEEWEGVICNGGFISGIRLEGMGLSGKIDINPLLELKGLRIFSILNNSFSGTIPEINRIGFLRALYLSGNQFSGEIPSDFFQKMRSLKKLWLNDNNFTGQIPSQIPLLLELRLENNQFSGSLPNLSKTLLIEFNVSNNKLEGEIPSSLSKFSASSFSENPSLCGEKLNKPCQNSVEPPKPMENTEQGQNKDSITSDSNSSSKSSNTVKIAAIVVASIVVLLALLALLFVRSRQKKKEKGILGSVRSENNSEESSASVEVQVAAPEKKEEAGISKKSSRNGSSRRGKSGGGNCGVGDLVMVNSESGVFGMLDLMKAAAEVLGGGGFGSSYKAVMADGVAVVVKRMREMNVLTKDGFDAEMRKLGSFRHRNILTPLAYHYRKDEKLVVSEFVPKGSLQYLLHGDRGPSHADLDWPTVLKIVRGIVEGMIYLYTQLASSVLPHGNLKSSNILLGPDYEPMLVDFGLCSLINPSNLSQALFAYKTPEASQKGQVSPKSDVYCLGVVILEILSGKFPSQYLNNNGGIDVVQWANSAISEGRILEMLDRQLASSKSSIGQMERLLHVGFACTAGNPEQRPDMAEVLRRIEEIQNQGTQESGSKGQDEWSQRSFGSSSVGSQSGHHSLDFAIS	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele40g0207	685	SUPERFAMILY	L domain-like	29	210	-	-
	Lele40g0207	685	MobiDBLite	consensus disorder prediction	302	316	-	-
	Lele40g0207	685	Gene3D	Transferase(Phosphotransferase) domain 1	449	668	-	-
	Lele40g0207	685	Pfam	Protein kinase domain	377	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele40g0207	685	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	17	648	-	-
	Lele40g0207	685	Pfam	Leucine rich repeat N-terminal domain	29	69	IPR013210	-
	Lele40g0207	685	Gene3D	Phosphorylase Kinase; domain 1	372	448	-	-
	Lele40g0207	685	ProSiteProfiles	Protein kinase domain profile.	373	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele40g0207	685	MobiDBLite	consensus disorder prediction	646	685	-	-
	Lele40g0207	685	Gene3D	Ribonuclease Inhibitor	28	185	IPR032675	-
	Lele40g0207	685	MobiDBLite	consensus disorder prediction	226	261	-	-
	Lele40g0207	685	Gene3D	Ribonuclease Inhibitor	186	230	IPR032675	-
	Lele40g0207	685	MobiDBLite	consensus disorder prediction	297	348	-	-
	Lele40g0207	685	MobiDBLite	consensus disorder prediction	236	261	-	-
	Lele40g0207	685	SUPERFAMILY	Protein kinase-like (PK-like)	377	643	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele40g0207	Lele-ChrLele40	1603114	1605445	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele40g0207	12	645	Receptor kinase-like Gene Family	AT3G42880	43.425	1.46e-177	518

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele40g0207		Pkinase	5.5e-28	CL0016