Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0188 ATGGAGCGATATGTTTTCGAACGACGCAGCGATGGGGCGTTCCTCATTGTGAAAGTCTTCTTTGTTGGTAAAACGTTTGATTACTGGCAAATTTTGTGTTTGGCATCTAAACCTATTAAAGAAGCTGCGCTCGGAAATAGACCAGCGATTGCTTTCTGTGACACTGATTCTTCCATGAGATATGTTGACATGGGGATTCCAGCTAAGAACAAAGGGAAACACACATTGGTTGTCTCTTTTGCTTCCAGCAAGAATGGTACTGGATATATGAGGGGGATTTATTTTTCTACAGGGAACCTGAGGATGCCAACCGCAAATGGTGGCTTGCCTGCCACAATTGATCAAACACAGACGCCGCTGCCAATTCCGGCTGTTGCCGGTGTCAACTGGGCCCCAGAAGCTGAGATTGGGGGGAGTCTGTTCCAGCTCCACAAGTTTCTGCTCTGGAAACTGGCTGGGAATGAATGTCATGTGCCAGAAGCTAAATACTAA 492 0.4654 MERYVFERRSDGAFLIVKVFFVGKTFDYWQILCLASKPIKEAALGNRPAIAFCDTDSSMRYVDMGIPAKNKGKHTLVVSFASSKNGTGYMRGIYFSTGNLRMPTANGGLPATIDQTQTPLPIPAVAGVNWAPEAEIGGSLFQLHKFLLWKLAGNECHVPEAKY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0188 163 Gene3D - 27 93 - -
Lele40g0188 163 PANTHER 40S RIBOSOMAL PROTEIN SA 37 80 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lele40g0188 163 SUPERFAMILY Ribosomal protein S2 36 76 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0188 Lele-ChrLele40 1483236 1484476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0188 37 80 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 70.455 2.09e-15 70.1