Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele40g0175 | ATGGATGGCTTGGCAGGAACAGATGACAATATGAGTGACTCTCCGGGGATGGAATTAACTGGAAAGATCATGGTCATAGCTATAATATTCCTCTTTTTTGTGATTGTGGTCGTCTGTTTCCTCCATCTCTACGCCAAATTGTTCTGGTGGAGCATTGAAGGAAGCAGCAGCACCCCCCACCCCCGCCGCCGCCGCCGCCGCCGCTTTGTCTTCGCACCAGGTCAAGACCCCGCTATCTACGGCGTCCAGAGACGTGGACTTGAACCAGAAGTCCTTAGATCCTTACCTGTATCGGTATACCGACCAGAGGATTTCAAAGATGGTTTGGAATGTGCAGTTTGTCTCAGCGAGCTTGTTGATGGAGAAAAAGCAAGGATATTACCCAAATGCAATCATGGGTTTCACGTAGAATGCATTGATATGTGGTTCCAATCCCATTCTACTTGTCCACTTTGCAGGAACCTGGTCGCTTCCGAGTCCTCTGAATTCAATTACAGTCCAGATGTTCGAGGAAATGTCTCAGACAATTCTAGTCAGTCATCATCAGACTCGGAAAGTTCAGATGCTACGAGTGAGGAAGATTTAGAGTCTCCAAATTTCCCCACAAATGTGTTGATTTGGGGAAATCAAACCCAAGTAAATTCCATTGGCGCAGGTCCTTCTATTCAGGCACCTTCTTCCTCATCATCATCAGCGACAGCAGATAGTTGTGAAAGTGGAAACAATAACAATAGACGTAATGGAATGTTGGTGATTGACATACCAAGAGAGATGAATCAGTCATCTGTACCTTCTACTAGCAGGTGTGCTGAAGAGGATTTGAAGTCACCAATGACATCTAGATTCAAATCATTCACGAGGATGTTAAGCATGAAGTTCAGTCCTCGGAGTCCTAGTTCTGTCGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG | 936 | 0.4605 | MDGLAGTDDNMSDSPGMELTGKIMVIAIIFLFFVIVVVCFLHLYAKLFWWSIEGSSSTPHPRRRRRRRFVFAPGQDPAIYGVQRRGLEPEVLRSLPVSVYRPEDFKDGLECAVCLSELVDGEKARILPKCNHGFHVECIDMWFQSHSTCPLCRNLVASESSEFNYSPDVRGNVSDNSSQSSSDSESSDATSEEDLESPNFPTNVLIWGNQTQVNSIGAGPSIQAPSSSSSSATADSCESGNNNNRRNGMLVIDIPREMNQSSVPSTSRCAEEDLKSPMTSRFKSFTRMLSMKFSPRSPSSVDVEQAGRGQS | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele40g0175 | 311 | FunFam | RING-H2 finger protein ATL3 | 80 | 158 | - | - | |
Lele40g0175 | 311 | MobiDBLite | consensus disorder prediction | 216 | 247 | - | - | |
Lele40g0175 | 311 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 158 | IPR013083 | - | |
Lele40g0175 | 311 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Lele40g0175 | 311 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 15 | 159 | IPR044675 | - | |
Lele40g0175 | 311 | SUPERFAMILY | RING/U-box | 91 | 158 | - | - | |
Lele40g0175 | 311 | MobiDBLite | consensus disorder prediction | 166 | 203 | - | - | |
Lele40g0175 | 311 | CDD | RING-H2_EL5_like | 110 | 153 | - | - | |
Lele40g0175 | 311 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Lele40g0175 | 311 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Lele40g0175 | 311 | MobiDBLite | consensus disorder prediction | 166 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele40g0175 | Lele-ChrLele40 | 1389738 | 1390673 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele40g0175 | 16 | 290 | C3H Transcription Factor Family | AT1G53820 | 42.955 | 1.71e-67 | 211 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele40g0175 | 40 | 1389738 | 1390673 | Lele40g0175 | 40 | 1389738 | 1390673 | ECH | |
Lele37g0173 | 37 | 1426371 | 1427311 | Lele40g0175 | 40 | 1389738 | 1390673 | hybridization | |
Lele38g0182 | 38 | 1471940 | 1472875 | Lele40g0175 | 40 | 1389738 | 1390673 | hybridization |