Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0170 ATGTTTGTTGCAGCTGCTGCTCTAAGGGTATTGTTTGGCGGCTTGAATTCACCATCCCAGCTAGGTTGGCCTGCAAATGGTGATGATCCATATAGACAGCACTGGAAGGGCATTAGTTGCTCAGGCAACCGAGTTACGGAGATAAATCTTGGTCACAATCAACTCCAGGGCTCACTGAGTGTCGACTTTGAAAAGCTTTCTTCACTCTCCACATTATACAATTACTTTCTTTTATGCTCTCAGGAATGGGCAAAACAATCATTTTACAGATTGGATACCAGAACAGTTGAAAAACATAAACCTACAGATGGTAATGCATGGAGCTCAGGCCCTGCACCCCCACACCCACCTGGGACACCTCCTGTGACTACTAGAAGCATCCGTACTCACAAAACTGGTGGTGGCAGTGGAAGAAACGCCCCATCAGATGATGATACCAGTGACAATGATAAAAAATCTAGTGTAGGAGGTGGTGGCATTGCAGGAATAGTGATCTCCATCTTAATTGTTGAAGCAATAGTAGCATTCTTTCTGATGAAGAGGAGATCCAAGAAGCCATCTCCAGATATAGAAAATGCTGACAATCGGCCCTTTTGCTCCTCTTGCATGTTGTTATTGATATTACAGTCAGTGCAAACATCCTCTGTACCTGACACGAAGACTTTTGTTCGTTCTGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCATAAATCATTTGATGAAGATGAACTTTCAAAGAAGCCTGATATTGTAAAGAAAACTGTAACAGCTCTTGCAAATGTAAGATTATATTCTATAGCAGATCTACAGATTGCTACCAGCAGCTTCAATGTGGATCATCTTCTGGGTGAGGGATCTTTTGGACGCGTTTACCATGCTCAATTTGATGATGGAGAGGTTCTTGCCGTGAAGAAGATAGGTTCATCTGTCCTTCCTAATAATATGTCCAAAGATTTTATTGAAGTCGTTTCAAACATCTCCCAGTTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGTTCAGAGCATGGACAACGTCTTTTGGTCTATGAGTTTCGTAAGAGTGGATCACTACATGACTCCCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAAAATATTAAATCGACCAACATATTGCGCGATACGGAGCTTGATCCTCATCGTTCTGACAGTGGATTGGCAAGATATATTCCAAATGCCGACGAGGTATTAAACCATAATGCTGGATCGGGATACAAGGCACCTGAAGTTGGCTTATCTGGTCAGTATACTCTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGGAGCCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTCTAGTTCGATGGGCAACTCCACAGCTTCATGATATTGATGCATTGACTAAAATGGTTGATCCTGCACTGGAAGGTCTATTCCCTGTGAACTCTCTTTCTCGGTTTGCTGATGTTATCGCTCTTTGCGTTCAGCACTCTGAGGCGAATTGA 1620 0.4302 MFVAAAALRVLFGGLNSPSQLGWPANGDDPYRQHWKGISCSGNRVTEINLGHNQLQGSLSVDFEKLSSLSTLYNYFLLCSQEWAKQSFYRLDTRTVEKHKPTDGNAWSSGPAPPHPPGTPPVTTRSIRTHKTGGGSGRNAPSDDDTSDNDKKSSVGGGGIAGIVISILIVEAIVAFFLMKRRSKKPSPDIENADNRPFCSSCMLLLILQSVQTSSVPDTKTFVRSASFNLKPPPIDRHKSFDEDELSKKPDIVKKTVTALANVRLYSIADLQIATSSFNVDHLLGEGSFGRVYHAQFDDGEVLAVKKIGSSVLPNNMSKDFIEVVSNISQLHHPNVTELIGYCSEHGQRLLVYEFRKSGSLHDSLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSTNILRDTELDPHRSDSGLARYIPNADEVLNHNAGSGYKAPEVGLSGQYTLKSDVYSFGVVMLELLSGREPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPALEGLFPVNSLSRFADVIALCVQHSEAN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0170 539 Gene3D Ribonuclease Inhibitor 5 80 IPR032675 -
Lele40g0170 539 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 356 538 - -
Lele40g0170 539 SUPERFAMILY Protein kinase-like (PK-like) 260 536 IPR011009 -
Lele40g0170 539 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 242 355 - -
Lele40g0170 539 ProSiteProfiles Protein kinase domain profile. 278 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0170 539 Gene3D Transferase(Phosphotransferase) domain 1 357 539 - -
Lele40g0170 539 PANTHER OS01G0253100 PROTEIN 215 537 IPR045271 -
Lele40g0170 539 MobiDBLite consensus disorder prediction 122 142 - -
Lele40g0170 539 MobiDBLite consensus disorder prediction 99 155 - -
Lele40g0170 539 Pfam Protein kinase domain 279 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0170 539 Gene3D Phosphorylase Kinase; domain 1 240 355 - -
Lele40g0170 539 ProSitePatterns Protein kinases ATP-binding region signature. 284 307 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0170 Lele-ChrLele40 1353018 1358428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0170 6 72 Strubbelig Receptor Gene Family AT1G53730 46.377 5.50e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele40g0170 Pkinase 1.4e-35 CL0016