Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0164 ATGAGTGTCTCTTCAACTTTGGCTGTTTCAGCATTTCCCGAGATCGATCCAGACGACTCAGAATGCTATTTCTTTAGTCCTCTCGATTACAAGTACTCTAACAGTACTCGGCGTAACAGGACAACATCACTTGGCTACTGGAAAGTCACCGAGGACTCATAAGAAGTTGTAGAATCAACAACTCAAATATTTTCCCAACCAAATGAAGCTATAAACTCAAGGATTGAAGCTTCTTACCAACTAAATGAAGCTATCAACTCAATTCAAATACAATCTCAATCCCAATTAAATGAAGTTATAGAGTCAACTCTTGAACCACTACCCCAGTCAAATAAAGTTATATCTCCTGAACTATATTCAACCATTACCATTGGAACACCGTTTGATGTTGATTATGAAGAATTTAACAGTTTACTCTTGCAACTGGCTCCAACCATGGAGGAGCAAGGGTTATGGGAAATGGAGACCCCATCTCATATGTTGTATTGA 489 0.3865 MSVSSTLAVSAFPEIDPDDSECYFFSPLDYKYSNSTRRNRTTSLGYWKVTEDSXEVVESTTQIFSQPNEAINSRIEASYQLNEAINSIQIQSQSQLNEVIESTLEPLPQSNKVISPELYSTITIGTPFDVDYEEFNSLLLQLAPTMEEQGLWEMETPSHMLY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0164 162 SUPERFAMILY NAC domain 17 60 IPR036093 GO:0003677|GO:0006355
Lele40g0164 162 Pfam No apical meristem (NAM) protein 18 58 IPR003441 GO:0003677|GO:0006355
Lele40g0164 162 Gene3D NAC domain 6 85 IPR036093 GO:0003677|GO:0006355
Lele40g0164 162 ProSiteProfiles NAC domain profile. 1 120 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0164 Lele-ChrLele40 1291893 1293575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0164 1 56 NAC Transcription Factor Family AT3G10480 42.857 2.83e-10 55.8