Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0160 ATGGACGCATACTCCTCTGGAGGAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAAATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAACGCATTGAAGAGCATATAGGAACGAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGCTGGCGAAAGAGGCTCTTGAAAAGGGTGTTCCGATAGGACAAGCTCTTGACATAGACATCCCTCCTCCACGGCCCAAAAGAAAACCAACTAATCCTTATCCTCGGAAGACCAGTACTGGTTCTCCAGCATCACATAATGGAACAAAAGATCGAAAACTAACTTCTGTTTCACCTTCTCAGGGTAAACAAGCACTGGACTTAGAGAAAGAACCGCCTCCAGAGAAATCCGATGGAGATGAAAGACCAATAAATTTTACTGAAAATAAGGATGAGAACTGCTCAAGAGTATTTGCTATTCCACAGGAGGCACCCTGTTCCTCTATATCTTCAGCAAAGAACAGATCAATTTCATTGTCAGTGCCACTGAGAAACTCATGCATTCAAAGGGAGTTCATACCTTCGGTAAGAGTGGGAATTACTGGAGATGAAACAAATGAATCTTCTGTCACTATTGAAATTGAAAATCAGAAGTGCAAGAAAGATGAAGGAAAACTAGAACAGACAAAAGCCTCTAAATTGGAGGTTTCTGATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAACAGATGATCTCAATAGTGCATTAACAACAACAGAAGGGATACAAGGCAATCAGAATTACCCAAGGCATGTCCCAGGGCACGATCATGACGGGAACCTGGGAACAAATACACAAAACCCTCCCCAAGATATGCTATTACGAGACTCTATGTTTCATCCTGTGGGAGAGGTTAGTGGGCAACCTAATATTTTCTCAGATTCAGCTGCATCAAACACGAGCAAAAGTAAGAATAACACGCCTCGATCTTCTATTCATCAATTATTTCCTGCTTATCCTCCCATCCCTCAAGTTCTCTGTAGTCAAGATCATTGCCATTCATTTTTTCAAATGTCCTTCCCATTTTCAAGTCTCATTGTCTCCACCCTAATGCAAAATCCTGCAGCACATGCTGCAGCTAGTTTGGCTGCCACATTTTGGCCCTATGCAAATGCAGAAGCTTCAGCCGATTCTCCTGCTTCCTCTCAAGGAGGTCTCACATCAAGACAAACTGGCTCCCCTCCGAGTATGGCAGCTATTGCAGCTGCTACAGTGGCTGCTGCAACCGCATGGTGGACCGCCCATGGACTTCTTCCTTTGTGTGCTCCACTCCATTCTGCTTTCTCCTCTCCTCCCGCATCCGCGTTGGTAGTTCCTTCCATGAATACAGGCGAAGCACAAGCAGATAAGAAAGATCAAAAAGAGACTCTGGTTGAGAATCCTCCTCTGCAAGATCAGATGCCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAACATTCAGACTCCAAGACGCAAGCTGTTTCTTCATCAGATTCCAAGAGTGGAGATGCCAAGTTAACCGCTTCACCTAAGGCTGCTGAACATGACAAGAACGAAGCAATCTCTGAGCACCTTGATTCCAACAAGACCAACGGAAGAAAACCGGTTGACCGTTCTTCATGTGGCTCCAATACAACCTCTAGTAGTGATATAGAGACAGATGCATTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTAACACCAGATGCAACCCAATTAACAACTGAGCCTAGTAATCGCCGTAGTAGGAGTGCTGGCAACCTTCCTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGCGACAGGCCTTTCGGGCTCTCTTCTCCAGAGAGGTTTTGCCTCAAAGCTTTTCACCGCCATACTTGGAAAAGGACATTCAGAAAGGCCAAAAAAATGAGGATCACAAGCAGAACATGGTTGACAAAGACGAAGACCTTGACAGCAACAAATACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACAGGAAGAGGAGGGATTCCTAACCATAGGGCTGGGACGAGGAAAGCTTAAGGCATGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCAAAAGAAAATAGGGTTGGAACTACCAGTAACCACCAGGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGAGGGGGAGGCTTCGACTTGA 2268 0.4466 MDAYSSGGEVVVKTRKPYTITKQREKWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLAKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSTGSPASHNGTKDRKLTSVSPSQGKQALDLEKEPPPEKSDGDERPINFTENKDENCSRVFAIPQEAPCSSISSAKNRSISLSVPLRNSCIQREFIPSVRVGITGDETNESSVTIEIENQKCKKDEGKLEQTKASKLEVSDASGVKLVQSQKTDDLNSALTTTEGIQGNQNYPRHVPGHDHDGNLGTNTQNPPQDMLLRDSMFHPVGEVSGQPNIFSDSAASNTSKSKNNTPRSSIHQLFPAYPPIPQVLCSQDHCHSFFQMSFPFSSLIVSTLMQNPAAHAAASLAATFWPYANAEASADSPASSQGGLTSRQTGSPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASALVVPSMNTGEAQADKKDQKETLVENPPLQDQMPNGEYSEALQAQHSDSKTQAVSSSDSKSGDAKLTASPKAAEHDKNEAISEHLDSNKTNGRKPVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDATQLTTEPSNRRSRSAGNLPDSWKEVSEEGRQAFRALFSREVLPQSFSPPYLEKDIQKGQKNEDHKQNMVDKDEDLDSNKYSSDQVGVEKNMPFVENTQEEEGFLTIGLGRGKLKACRTGFKPYKRCSVEAKENRVGTTSNHQGEEKGPKRIRLEGEAST 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0160 755 PANTHER SWI/SNF COMPLEX-RELATED 10 636 - -
Lele40g0160 755 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lele40g0160 755 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 534 558 - -
Lele40g0160 755 CDD SANT 26 69 IPR001005 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 593 612 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 85 160 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 728 755 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 559 577 - -
Lele40g0160 755 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 138 159 - -
Lele40g0160 755 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lele40g0160 755 Gene3D - 26 73 - -
Lele40g0160 755 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 103 133 - -
Lele40g0160 755 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lele40g0160 755 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 739 755 - -
Lele40g0160 755 SMART sant 23 71 IPR001005 -
Lele40g0160 755 MobiDBLite consensus disorder prediction 640 690 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 578 592 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 272 345 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 490 529 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 473 622 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 651 675 - -
Lele40g0160 755 MobiDBLite consensus disorder prediction 319 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0160 Lele-ChrLele40 1232972 1239235 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele40g0160 Myb_DNA-binding 1.4e-13 CL0123