Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0158 ATGGCTCAATCTCAACAATCTCATTCTCAGCCCAAGCCTCTACACAACGAACAGAGCAGCAATCACCTACGGAAGGAGCAAGCACCAAAAGTAGATGACGTTGAAGAAGAGAGCTTCTCATACGCCATGCAGCTCGCGACTTCTACGGCAATTTCCATGACGATGCAAACAGCGGTGGAGCTCGGAATATTCGACGTCATTCATAGTGCTGGCAACAACGCCAGGCTCTCTGCCGCCGAGATCGCGACGGAGCTTTCTTGCAAGAACTCTGAAGCGCCTTCCGCGCTCGATCGTCTCCTCCGGCTTCTAGCGTCTCACTCTGTTCTTTCCTGTTCCGTTGTCGCCGACGAGGATCGAGGGCCGGGGTGTTTCCGACGATTGTACGGCCTCGCTCCGGTGGCCAAATTCTTTGTGAGAAATGCGGATGGAGTGTCGTTGGGCCCTTTTATGGCGTTGGTTCAAGATAAGGTCCTCCTTGATAGCTGGCCACAATTGAAGGATGCAATATGTGAAGGAGGTATAGCGTTCAATAGGGTGCATGGCTCACATTGGTTTGAGTATCCGAGACTGGATTCGAGGTTCAACGATGTTTTCAACAAGGCAATGCTGAATCATACCCCTTTAGTTTTGACTAAGATTCTTGAATCCTACAAAGGTTTTAAGGATGTCACTACACTCGTTGACGTTGGTGGTGGTCTTGGGATTACTCTGAGCTTGATCACCTCCAGATATCCACATATTCGCGGAATCAATTTCGACTTGCCTCATGTCATCCAACACGCTCCTCCTTATCCTGGAGTGGAACACTTGGGAGGAGATATGTTTGAAAGTGTGCCTCAAGGAGAAGCCATCTTTATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCCTGAAGCTCTTGAAGAACTGTCATGATGCGATTCCTGAAGATGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCAATGGTTCCAGAGATTTCTGCTGCTGCGAAGACCACCTCCCAACTTGATCTGATTATGATGACTCAGACCTCAGGTGGCAAGGAGAGAAGTGAGCAAGAATTCATGGAGTTGGCTACATCAGCTGGGTTTAGAGGCATTAGATTTGATTGTTTTGTTCGTAACTTTTGGGCTATGGAGTTCTTCAAATAG 1158 0.481 MAQSQQSHSQPKPLHNEQSSNHLRKEQAPKVDDVEEESFSYAMQLATSTAISMTMQTAVELGIFDVIHSAGNNARLSAAEIATELSCKNSEAPSALDRLLRLLASHSVLSCSVVADEDRGPGCFRRLYGLAPVAKFFVRNADGVSLGPFMALVQDKVLLDSWPQLKDAICEGGIAFNRVHGSHWFEYPRLDSRFNDVFNKAMLNHTPLVLTKILESYKGFKDVTTLVDVGGGLGITLSLITSRYPHIRGINFDLPHVIQHAPPYPGVEHLGGDMFESVPQGEAIFMKWILHDWSDEWCLKLLKNCHDAIPEDGKVIVVDAVLPMVPEISAAAKTTSQLDLIMMTQTSGGKERSEQEFMELATSAGFRGIRFDCFVRNFWAMEFFK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0158 385 Pfam Dimerisation domain 53 104 IPR012967 GO:0046983
Lele40g0158 385 CDD AdoMet_MTases 225 322 - -
Lele40g0158 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 382 IPR029063 -
Lele40g0158 385 FunFam Caffeic acid O-methyltransferase 138 385 - -
Lele40g0158 385 SUPERFAMILY "Winged helix" DNA-binding domain 34 140 IPR036390 -
Lele40g0158 385 FunFam Caffeic acid 3-O-methyltransferase 19 137 - -
Lele40g0158 385 Pfam O-methyltransferase domain 162 367 IPR001077 GO:0008171
Lele40g0158 385 MobiDBLite consensus disorder prediction 1 17 - -
Lele40g0158 385 PIRSF O-mtase 20 385 IPR016461 GO:0008168
Lele40g0158 385 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 385 IPR016461 GO:0008168
Lele40g0158 385 Gene3D Vaccinia Virus protein VP39 138 385 IPR029063 -
Lele40g0158 385 PANTHER O-METHYLTRANSFERASE 42 371 IPR016461 GO:0008168
Lele40g0158 385 MobiDBLite consensus disorder prediction 1 31 - -
Lele40g0158 385 Gene3D - 19 137 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0158 Lele-ChrLele40 1205086 1206824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0158 27 385 Monolignol Biosynthesis Gene Families AT5G54160 50.139 3.24e-133 384