Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0154 ATGTCCATGGCGGTGCAAACGGTGGCTGAGCTCGGCGTCCTCGAAATCATTCACAAAGCTGGGCCAAGGGCAAGGCTCTCCGCCGCGGAGATCGCGTCACAACTTCCTTGCAAGAACTCTGAAGCGCCTTCCGCTCTTGATCGTCTCCTCCGGCTTTTGGCGTCTCACTCTGTTCTTCACTGTTCCGGCATCCCTGATGAAACCCAAGGGCCAGGATGTTTCCAGCGGTTGTACAGCCTTGCTCCGGCGGCAAAATTCTTTGTGCGAAATGCTGATGGTGTGTCGTTGGGCCCATTCATTGCGTTGTTTCATGATAAAGTCTTCCTGGAAAGCTGGTCTCAAATGAAAGAGGCAATATTGGAAGGGGGAATCGCATTCAATAGGGTGCATGGATCGCAGGCATTTGAGTATCTAGAACAGGATTCAAGGTTCAATGATGTTTTTAACAAAGCAATGGTGAATCATACGTCTTTAGCAGTGTCCAAGATTCTTGAATCCTACAAAGGTTTTGAGGACATCACAAGACTCGTCGATGTTGGAGGAGGTTTTGGGGTTACTCTCAACTTGATCACTTCGAAATATCCTCATATGTTAGGAATCAATTTCGACTTGCCTCATGTCCTTCAACATGCTCCTTCTTATCCTAGAGTGGAACACGTGGGAGGTGATATGTTTGAAAGTGTGCCTAAGGCCGATGCCGTCTTGATGAAGTGGATACTGCATGATTGGAGTGATGAGTTGTGCTTGAAGCTGTTGAAAAACTGCTACGAAGCAATTCCAGAAGATGGGAAGGTGATAGTGGTGGAAGCATTATTTCCCGTTGTACCAGAAACCTCAGCTGCCATGAAGAGCATATCGCAACTTGATGTGCATATGATGACTCAGGGCCCAGGCGGCAAGGAGAGAAGCGAGCATGAGTTCATGGAATTAGCCACGTCAGCTGGGTTTAGTGGTATTAGATATGAATGCTTTGTTCGTAACTACTGGGTCATGGAGTTCTTCAAATAG 1008 0.4742 MSMAVQTVAELGVLEIIHKAGPRARLSAAEIASQLPCKNSEAPSALDRLLRLLASHSVLHCSGIPDETQGPGCFQRLYSLAPAAKFFVRNADGVSLGPFIALFHDKVFLESWSQMKEAILEGGIAFNRVHGSQAFEYLEQDSRFNDVFNKAMVNHTSLAVSKILESYKGFEDITRLVDVGGGFGVTLNLITSKYPHMLGINFDLPHVLQHAPSYPRVEHVGGDMFESVPKADAVLMKWILHDWSDELCLKLLKNCYEAIPEDGKVIVVEALFPVVPETSAAMKSISQLDVHMMTQGPGGKERSEHEFMELATSAGFSGIRYECFVRNYWVMEFFK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0154 335 Pfam Dimerisation domain 3 54 IPR012967 GO:0046983
Lele40g0154 335 CDD AdoMet_MTases 175 268 - -
Lele40g0154 335 Gene3D - 1 87 IPR036388 -
Lele40g0154 335 FunFam Caffeic acid O-methyltransferase 88 335 - -
Lele40g0154 335 PANTHER O-METHYLTRANSFERASE 2 320 IPR016461 GO:0008168
Lele40g0154 335 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 335 IPR016461 GO:0008168
Lele40g0154 335 SUPERFAMILY "Winged helix" DNA-binding domain 2 90 IPR036390 -
Lele40g0154 335 PIRSF O-mtase 1 335 IPR016461 GO:0008168
Lele40g0154 335 FunFam Caffeic acid 3-O-methyltransferase 1 87 - -
Lele40g0154 335 Pfam O-methyltransferase domain 112 317 IPR001077 GO:0008171
Lele40g0154 335 Gene3D Vaccinia Virus protein VP39 88 335 IPR029063 -
Lele40g0154 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 333 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0154 Lele-ChrLele40 1182859 1184846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0154 1 335 Monolignol Biosynthesis Gene Families AT5G54160 53.134 6.19e-131 376