Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0151 ATGCCTATTATTGGATGCATATTCTATATTCTTTTCCCTTTTTCGGGGTTCACTCTGAAAAATGATATGGAAGCAACTCTTATCTTGTTTCTCTTGCAGTTCTTCGGTGAGCATTTGGAAGTAAATTGTTTCGAACAAGGCTTCATCAACACAGAGGATGAGGAACAAGTTTATATATCGAGCTTAGAGGATGAGAAGGTGCCATTTCTGCGGATGTTGCAGCGTGTGGAATCTCCACAACAGTTTTTCCCATTCTCTGAGGAAAAATTTCAAACACTTTTGAGGCTACAGAACATGAAGAAACAACCACCACCATGGGAAGAAGAAACTCACATACCCAGATTCGAGACCCAAATCCAAGCTAATAAAGAACTTGAAAGCTGTGTGACACAAGACGTTGTCGAGATCCCCTCGCCGTTGAAATCCGAAACCAACGAAGAATGTCATCTTCTTCCTCGTCCAGCCACAATGGTTCAGAAAGAACCGGCCAATATTCAACCCGAAAATTCTAGCAGAGACCCCAGACGGAGAAAGCGGAAGAGAACGAGACCAGTCAAGAACAAGGAAGAAGTGGAGAACCAGAGAATGACCCACATTGCCGTCGAACGGAACCGGCGACGCCAGATGAACGACCATCTCAATGTTCTAAGGACCCTCATGCCTCCTTCCTATATTCAAAGGGGTGACCAAGCGTCTATCATCGGAGGTGCCATTGATTTCGTGAAGGAATTGGAACAACTACTTCAAACTCTGGAGGCACAGAAGAGGATTAGAAAGAACGAAGAGCTTGGATCTTGTTATGGAGGAGAGAGTCTGAAAGCATCATCACTGAGCTTCGAAGGAGAAGGAGAAGTAGAGTGTAGTGGGGAAGAAGAAGAGGTGAAGGAAGCAGAGATCATAGAGGTGATGGTGATTCAGACGCATGTGAACTTGAAGATTCGATGCAGAAAAAGACAGGGCCAATTGGTGAGAGCCATTGTTGGGTTGGAAGAACTTAGGCTCAGCGTTCTGCATCTAAACATCACCTCGTCGCTGGGATCGGTACTATACTGTTTCAATCTCAAGATGGAAGAAGAGTGTAAGGTAGGGTCGGCGAATGAAATAGCAGAAGCGGTTCGTAATATATTCGGAGCGATGGATAATTAG 1146 0.4485 MPIIGCIFYILFPFSGFTLKNDMEATLILFLLQFFGEHLEVNCFEQGFINTEDEEQVYISSLEDEKVPFLRMLQRVESPQQFFPFSEEKFQTLLRLQNMKKQPPPWEEETHIPRFETQIQANKELESCVTQDVVEIPSPLKSETNEECHLLPRPATMVQKEPANIQPENSSRDPRRRKRKRTRPVKNKEEVENQRMTHIAVERNRRRQMNDHLNVLRTLMPPSYIQRGDQASIIGGAIDFVKELEQLLQTLEAQKRIRKNEELGSCYGGESLKASSLSFEGEGEVECSGEEEEVKEAEIIEVMVIQTHVNLKIRCRKRQGQLVRAIVGLEELRLSVLHLNITSSLGSVLYCFNLKMEEECKVGSANEIAEAVRNIFGAMDN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0151 381 Gene3D - 184 266 IPR036638 GO:0046983
Lele40g0151 381 CDD bHLH_AtFAMA_like 196 265 - -
Lele40g0151 381 PANTHER MAX DIMERIZATION, MAD 142 377 - -
Lele40g0151 381 SMART finulus 199 250 IPR011598 GO:0046983
Lele40g0151 381 Coils Coil 241 261 - -
Lele40g0151 381 Pfam Helix-loop-helix DNA-binding domain 194 245 IPR011598 GO:0046983
Lele40g0151 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 193 244 IPR011598 GO:0046983
Lele40g0151 381 MobiDBLite consensus disorder prediction 156 191 - -
Lele40g0151 381 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 259 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0151 Lele-ChrLele40 1152731 1155005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0151 72 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 41.899 3.50e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele40g0151 HLH 3.3e-10 No_clan