Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0148 ATGGTACGCTGGGAGAAGTTTTTACCTCGGATGGTGCTTAGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCATGTGATCGCGGCCCTTCTCCGGAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGACTAAAGGCATGGGAGACGCTGAAGAGGAAAACTTCTGAAATAGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTTACGTTGATCATGGAACATGATATGTGCAAGAACATTCCTGTCATAATGATGTCTACTCAGGATTCAGTTAGTTTGGCATTGAAATGCATTTTGAAAGGTGCAGCTGATTTTCTCATAAAACCTGTTCGGAGAAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAAGACATGAGATTGGCTGGCAACCTCAAAATATACCATTTCCACAGAAAAACCTGGAAACTACTTCTGAAAACAATGCTGCCAGCAATCATTCAAGTGGATCTGTGGCTTCCACACAGAAAAATAATGGACGCCCTGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACATCGCCATTTTTGGAAGCTGAGAGTGCATACGTGCAAAATATGCAGGATACATCCCATATGAAGAGTTCTTCTAATTTGAGCAACAATGACACGGTACAGAATGAAGACTCAACCATATTGGGATTGGAAAAGCAATCAATTAAGCATAACAGTGAAACTGGAGATAAGTCAGGGGTATTGCTATCACCGTCTGCAAAGCGTGACAAGAATTTTAAATCAACAGATTTTGGGCAGGATCGAGGATATGATAGTGCTGAAAAGGAGAATCAAGTGGAAGTTATTAGACGAGAGTCAAGCAGAGAAAATCCTAACATGGATACAGAGATACACGGATGCAACAATGAACTGGTAGAACCCTCTAGAGGAGTTATTGATTTGATTGCCACATTCAAGAATCTACCAGTAAAGAATGATGAAAGTTGTAACCTCAGCGGTAGTGGTGCAAAGAAGTTTGATTTTGATCCACGATTGGAGCTTTCTCTAAGACGAGATTTTCCCGGCAGCTCATCTAAACAAGCAATTGATGAAAAACAGGCCTTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAGCGGGGGTAAGTTTCCATCACCATTTGGAAGCTCTGCAAAAGCAGGTGGCCGCAATGGGAATTCTCATGAAGCCAGTAGATCATCTAGAAATACAGTTGATACTTCCTGTCAATATGGTGGCTCGAATCATAGTTCAGCGAATATGGCAACCCTCGCCATTGGTCAATCTGGTCAAGTTGAAGTACAGTCGACAAACAGTCAACTTGGACCAATTCCTGCTACTGTTGTTGCTTCTGATAACAAGCCTACTGAATCTGAAACTGTTATTCCATCTACGTTCTTCACACAATCTGATGTTCGTTCCAGGAGTCCTAAACCTAATCGCCCGAAAGAGAGTTCTCCTTCCATTCTCACAAGTAACTCTCTCCAGTCCAATCATGAAAGTCACAATTCGGAACAACGTTTTCACTGTTCTGATGATGCCACTTGTATTTCTCGTGATAAAACTGCGAATGAAAAAAGCAATTTGGATCCTGCAAGGCGACATTCTTCTGCTGTTGATCAGAGCACTAGAAATGTCTCATGCCACGACCCTGCAAATCAGAACAATAACGATGATAATAATACAAGCGCATATAAACTCGCATGCAAAATTGATGGAAATGTTTCTTCAGCTTCAGTAGTTGAGAGCAACCCTGAAAATTATGGGGACAGTGGCCATCATAATAATGATGGATATGGAGGTACATATTCTCATTGTCCCACCCACAGAGAAGCTGCTCTAACAAAGTTTCGCATGAAGCGGAAAGAGAGGTGCTTCGAGAAAAAGGTCCGATATCTAAGCAGAAAAAAACTAGCAGAGCAGCGTCCTCGGGTTAAAGGGCAGTTCGTACGCCAAGTCCATAACGATCATGCTGTTGCTGATGTTGATGGTGGTTCCTGA 2025 0.4232 MVRWEKFLPRMVLRVLLVEADDSTRHVIAALLRKCSYKVAAVPDGLKAWETLKRKTSEIDLILTEVELPSISGFALLTLIMEHDMCKNIPVIMMSTQDSVSLALKCILKGAADFLIKPVRRNELRNLWQHVWRRHEIGWQPQNIPFPQKNLETTSENNAASNHSSGSVASTQKNNGRPEKGSEAQSTCTSPFLEAESAYVQNMQDTSHMKSSSNLSNNDTVQNEDSTILGLEKQSIKHNSETGDKSGVLLSPSAKRDKNFKSTDFGQDRGYDSAEKENQVEVIRRESSRENPNMDTEIHGCNNELVEPSRGVIDLIATFKNLPVKNDESCNLSGSGAKKFDFDPRLELSLRRDFPGSSSKQAIDEKQALNHSKASAFSWYSGGKFPSPFGSSAKAGGRNGNSHEASRSSRNTVDTSCQYGGSNHSSANMATLAIGQSGQVEVQSTNSQLGPIPATVVASDNKPTESETVIPSTFFTQSDVRSRSPKPNRPKESSPSILTSNSLQSNHESHNSEQRFHCSDDATCISRDKTANEKSNLDPARRHSSAVDQSTRNVSCHDPANQNNNDDNNTSAYKLACKIDGNVSSASVVESNPENYGDSGHHNNDGYGGTYSHCPTHREAALTKFRMKRKERCFEKKVRYLSRKKLAEQRPRVKGQFVRQVHNDHAVADVDGGS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0148 674 SMART REC_2 13 128 IPR001789 GO:0000160
Lele40g0148 674 MobiDBLite consensus disorder prediction 257 293 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 205 224 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 442 515 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 233 247 - -
Lele40g0148 674 Pfam CCT motif 618 660 IPR010402 GO:0005515
Lele40g0148 674 MobiDBLite consensus disorder prediction 391 422 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 394 422 - -
Lele40g0148 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 284 IPR045279 GO:0009736
Lele40g0148 674 MobiDBLite consensus disorder prediction 143 188 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 233 297 - -
Lele40g0148 674 SUPERFAMILY CheY-like 13 138 IPR011006 -
Lele40g0148 674 MobiDBLite consensus disorder prediction 542 569 - -
Lele40g0148 674 Gene3D - 11 221 - -
Lele40g0148 674 ProSiteProfiles Response regulatory domain profile. 14 132 IPR001789 GO:0000160
Lele40g0148 674 ProSiteProfiles CCT domain profile. 618 660 IPR010402 GO:0005515
Lele40g0148 674 Pfam Response regulator receiver domain 15 126 IPR001789 GO:0000160
Lele40g0148 674 MobiDBLite consensus disorder prediction 442 509 - -
Lele40g0148 674 CDD psREC_PRR 15 118 - -
Lele40g0148 674 MobiDBLite consensus disorder prediction 531 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0148 Lele-ChrLele40 1128491 1132564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0148 603 666 Response Regulator Gene Family AT5G24470 68.182 4.31e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele40g0148 Response_reg 4.4e-21 CL0304