Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0142 ATGCAAGATCTGGCTATGGTGGTATCCCATTCAGCAACTGACGAATACCATTGGCAGCCGAGCGGCAACTGCAAGGAACAAGTCTGCTCTGATCTCAGTTGCGTTAGCTTAGAAATGTCGACCGGAGAGATTGCTTGCACTTACGCGGTTCTCATTCTCTTTGATGATAAAATTCCAGTCACTGCCGAGAAGATATCGACCTTGGTGAAAGCTGCAAATGTTGATGTTGAATCTTATTGGCCAAGCTTGTTCGCTAAACTTGCTGAGAAGAGAGACATTGGGGATTTGATATTGAATGCTGGAGGGGGTGGGACTCCAGTTGCCGTTGCAGCCCCAGCTGCAGCTGCTGCTGGCGGCGGCGGCGCAGCCGCTCCTCCTCCCGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGCGATGATGACATGGGATTCAGCTTGTTTGATTAG 453 0.5055 MQDLAMVVSHSATDEYHWQPSGNCKEQVCSDLSCVSLEMSTGEIACTYAVLILFDDKIPVTAEKISTLVKAANVDVESYWPSLFAKLAEKRDIGDLILNAGGGGTPVAVAAPAAAAAGGGGAAAPPPAEEKKKEEPQEESDDDMGFSLFD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0142 150 CDD Ribosomal_P1 43 149 - -
Lele40g0142 150 MobiDBLite consensus disorder prediction 116 150 - -
Lele40g0142 150 FunFam 60S acidic ribosomal protein P1 39 101 - -
Lele40g0142 150 Gene3D - 39 101 IPR038716 -
Lele40g0142 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 39 150 - -
Lele40g0142 150 Hamap 50S ribosomal protein L12 [rpl12]. 44 150 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele40g0142 150 Pfam 60s Acidic ribosomal protein 60 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0142 Lele-ChrLele40 1107569 1109745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0142 39 150 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.407 8.42e-38 123