Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0141 ATGGCGGGAGGGCAATACAACGACAAAACATTGACAAAAATCTTCGTGGGAGGTCTTGCTTGGGAGACTCAAAGGGACACAATGAGTAGATATTTTGAGCAGTTCGGAGAGATCCTTGAAGCTGTTGTTATCACAGACAAGAAGACAGGAAGATCCAAGGGTTATGGCTTTGTCACATTTAAGGATCCAGAAGCGGCCTTGCGAGCATGCCAGAACCCTTCTCCAGTTATTGATGGAAGAAGAGCAAACTGCAATCTTGTTTCTTTTGGTGCAAACAAGAATCGGCCTCCAACTCCTCAACTTGGTACGGGAAGGTTCAGAACAGCAGCTGGAATGGTGGGCCTGCCAGCAGCATATCATGGCTCTTCCTCCTCAATTTTCCGTCAACCCACAGGACAATACACATTTCCACATTCACCTTACGGTTACAGATTCTCTGGATATTCACAAGACTCCATATATCCCTTGAACTATTACAATGTGTATGGAGGTCGACAATTTTCATCATATTATTCAACCAGTAACATTTACCCATTCTGTACTCCTCAATATGCACAGAGTGGCCATCTGGCTCATGGTTTTGGAGTTCATCAGTATGATCCTCAAATGTTAAACTTTCCAGTTCTTCATCAACAGCACTATGGCACTGTCTCTCCTCCAGTTCTGCCATTTCCTTCTTCCATGCCAATGCCAACTACTAGCGAAGTGGCAGCAGAGGAGCAGACAGTATCAGTAGGGCCAGGTGCTTCACAAGTCTCTGCAGTAAAAGCTTTAGAACAAAACTCTTAA 789 0.4461 MAGGQYNDKTLTKIFVGGLAWETQRDTMSRYFEQFGEILEAVVITDKKTGRSKGYGFVTFKDPEAALRACQNPSPVIDGRRANCNLVSFGANKNRPPTPQLGTGRFRTAAGMVGLPAAYHGSSSSIFRQPTGQYTFPHSPYGYRFSGYSQDSIYPLNYYNVYGGRQFSSYYSTSNIYPFCTPQYAQSGHLAHGFGVHQYDPQMLNFPVLHQQHYGTVSPPVLPFPSSMPMPTTSEVAAEEQTVSVGPGASQVSAVKALEQNS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0141 262 Gene3D - 5 93 IPR012677 -
Lele40g0141 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 71 IPR000504 GO:0003723
Lele40g0141 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 94 IPR000504 GO:0003723
Lele40g0141 262 SMART rrm1_1 13 85 IPR000504 GO:0003723
Lele40g0141 262 SUPERFAMILY RNA-binding domain, RBD 11 99 IPR035979 GO:0003676
Lele40g0141 262 PANTHER BOULE-RELATED 4 235 IPR037366 -
Lele40g0141 262 CDD RRM_RBM24_RBM38_like 12 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0141 Lele-ChrLele40 1103788 1105193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0141 14 88 C2H2 Transcription Factor Family AT2G19380 45.333 7.06e-15 72.4