Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0134 ATGGGCCCAACGAGAAGCAAAAGAAAAGGAATATTCAGATTCAGTGAATACTTTATTTCCTCTGGTGGCCACGATAAGGTTCTTTCGTATTTGTTGAGAGATTCAGTGAACTTCTCTGAAGAATGCTCGAATAGGGGAACTGGAAATTATGCGTGTTTTTCCTTCACGTGGATGATTGATTCGTTCAATAACATCTGAAGAGATAGTGGGACCCACCTCATGCTCCTGGCCCCACACGCTCCAGACACGTACTTATCTTCTTCATCCATTCATCCTCTCTTTACTGCAAAGTATCCCCTACATTCAAAACCACATCAGAAAAATCAGAACTTGAAGGCAAAAATGAGCATGAATGCCGCTAAATCTCGGACCCGCGTGGGAAAATACGAGCTGGGCAAAACCATTGGCGAGGGTAGCTTCGCTAAGGTGAAGTTTGCGAGAAACGTTGAGACAGACCAACACGTCGCCATCAAAATCCTCGACCGTAACCATGTTCTTCGACATAAGATGGTGGAACAGGTGATGGCAAGCAAAACAAAGGCTAATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGCGTGTTTCACAGAGACTTGAAGGATGATGCACTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAAAGGCTATGATGGTTCGGCAGCTGATATTTGGTCATGTGGCGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAAATGGCTTTGTATCAGAAAATTAGCAAGGCTGAATTCTCATACCCATCATGGTTTACACAAGATGCAAAGAAACTGCTGCATCGTATTCTTGATCCAAACCCTCTCACACGGATAAAAATTCCAGAACTCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCTAAGGAAAACCTCGTGACAGAAAGGAAAGAAAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCACAGAGTTTCACTCTTGACAGTTTGTTTGAGAAAGAGATGGGTATAGTAAAGAGAGAAACAAGATTTACTTCTCAGCGCCCTGCACATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCATTGGGATTTAATGTTCACAGGCGAAACTACAAGATGAAACTTCAAGGTGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGACAGGGGGTGACACGCTGGAGTTTCACAAGGCAAGTAGTGAGTGTGCACACTTAATGTGGGTCACTGAAGGCACGAGTTTTTGGGCAATGCCAGAGCAAAGCAAGTATCAGTTGGAATTGGACTAA 1494 0.4364 MGPTRSKRKGIFRFSEYFISSGGHDKVLSYLLRDSVNFSEECSNRGTGNYACFSFTWMIDSFNNIXRDSGTHLMLLAPHAPDTYLSSSSIHPLFTAKYPLHSKPHQKNQNLKAKMSMNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETDQHVAIKILDRNHVLRHKMVEQVMASKTKANDGRLKENEARQYFQQLINAVDYCHSRGVFHRDLKDDALLRTACGTPNYVAPEVLNAKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYQKISKAEFSYPSWFTQDAKKLLHRILDPNPLTRIKIPELLEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFTLDSLFEKEMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKASSECAHLMWVTEGTSFWAMPEQSKYQLELD 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0134 497 Gene3D Kinase associated domain 1, KA1 355 477 - -
Lele40g0134 497 FunFam Non-specific serine/threonine protein kinase 355 476 - -
Lele40g0134 497 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 123 466 - -
Lele40g0134 497 ProSiteProfiles Protein kinase domain profile. 129 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0134 497 Gene3D Phosphorylase Kinase; domain 1 118 179 - -
Lele40g0134 497 Gene3D Transferase(Phosphotransferase) domain 1 180 220 - -
Lele40g0134 497 SMART serkin_6 129 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0134 497 Pfam Protein kinase domain 222 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0134 497 Pfam Protein kinase domain 180 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0134 497 SUPERFAMILY Protein kinase-like (PK-like) 126 333 IPR011009 -
Lele40g0134 497 Pfam NAF domain 358 417 IPR004041 GO:0007165
Lele40g0134 497 Gene3D Transferase(Phosphotransferase) domain 1 221 344 - -
Lele40g0134 497 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Lele40g0134 497 ProSiteProfiles NAF domain profile. 356 380 IPR018451 GO:0007165
Lele40g0134 497 CDD CIPK_C 362 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0134 Lele-ChrLele40 1024717 1032812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0134 122 482 CBL-interacting serine-threonine protein kinases AT1G01140 61.379 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele40g0134 Pkinase 3.5e-19 CL0016