Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0126 ATGTTAGATCATCATCATCATCACTATGCTATGGAATATTCTCATTTAGCACAAGTTGCGGAAACTGCAGAAGCAGCTTATAGCAGCACGAGGAAGAGGAAGGGCAACAAAATCCAGAGAAGGTTCAGTGATGACCAGATCAGATCATTGGAATCCATGTTTGAGACAGAGTCAAGGCTTGAGCCGAGGAAGAAGGTTCAGCTTGCAAGAGAGCTAGGGTTGCAGCCGAGACAGGTCGCTATTTGGTTCCAGAACAAAAGGGCAAGATGGAAGTCCAAGCAGATTGAACGAGACTATAGCATACTTAGAAATAATTATACCAACTTGGCTTCAAGGTTCGAAGCTCTCAAGAAGGAGAAGGAGGCATTGCTAATTCAGTTGCAGAAGCTGAATGATCTAATACAGAAGCCAAACGAGCATGAAGGTGAGGGCTATAATAATACACAAGTGAAACCAGCGAACAGCATGGACAGTGTATCAGAAAATGGAGACAACGTTAAAGTGAAAGCTGAGGAAAATCCAAGCTCAACAACAATGGAGAGATCATCAGAGCAGGTGCTGGGTGTTGTCTCAGATGATGACAGCAGTATAAAAGCAGAATACTTTGGGCTTGAAGATGAACCTAGTCTTCTGAATTTTGTGGAGCAAGCAGATGATTCACTGACTTCAGCGGAAGATTGGCGTACTTTTGAATCTGATGAACTCTTAGACGAATCTGCTGTTGGTTACCAGTGGTGGGATTTCTGGTCCTGA 753 0.4356 MLDHHHHHYAMEYSHLAQVAETAEAAYSSTRKRKGNKIQRRFSDDQIRSLESMFETESRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQIERDYSILRNNYTNLASRFEALKKEKEALLIQLQKLNDLIQKPNEHEGEGYNNTQVKPANSMDSVSENGDNVKVKAEENPSSTTMERSSEQVLGVVSDDDSSIKAEYFGLEDEPSLLNFVEQADDSLTSAEDWRTFESDELLDESAVGYQWWDFWS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0126 250 Pfam Homeobox associated leucine zipper 93 134 IPR003106 GO:0006355|GO:0043565
Lele40g0126 250 Pfam Homeodomain 40 91 IPR001356 GO:0003677
Lele40g0126 250 PRINTS Lambda-repressor HTH signature 64 73 IPR000047 GO:0003677
Lele40g0126 250 PRINTS Lambda-repressor HTH signature 73 89 IPR000047 GO:0003677
Lele40g0126 250 MobiDBLite consensus disorder prediction 141 162 - -
Lele40g0126 250 ProSitePatterns 'Homeobox' domain signature. 68 91 IPR017970 GO:0000981|GO:0006355
Lele40g0126 250 MobiDBLite consensus disorder prediction 138 163 - -
Lele40g0126 250 SUPERFAMILY Homeodomain-like 25 94 IPR009057 -
Lele40g0126 250 FunFam Homeobox-leucine zipper protein ATHB-7 21 93 - -
Lele40g0126 250 CDD homeodomain 37 94 IPR001356 GO:0003677
Lele40g0126 250 Coils Coil 99 133 - -
Lele40g0126 250 SMART HOX_1 36 97 IPR001356 GO:0003677
Lele40g0126 250 ProSiteProfiles 'Homeobox' domain profile. 33 93 IPR001356 GO:0003677
Lele40g0126 250 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 31 201 IPR045224 GO:0003700
Lele40g0126 250 Gene3D - 27 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0126 Lele-ChrLele40 956400 957238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0126 39 250 Homeobox Transcription Factor Family AT2G46680 55.066 9.74e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele40g0126 Homeodomain 1.6e-16 CL0123