Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0118 ATGGAAGGAATACCTAATCAGAACTCAGTGACAAAGCCAGTAATGATAGAGAAGAAGGCGAGGCCACAAGAACAATTGAACTGCCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTACTACAACAACTATAGCCTGACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTAATTCCTCTCCCTCTTCTTCATCAACCTCATCATCGTCATCAAAGGTTCCTGATCTAAATCCACCATTACCGAGTAGCCTCTCAGGGTTGAAGGATCCAACAAGTTTGAACCTCTCTCGAAGCCAGATGATGAACCAAAGCTTCCCAATGAATTGTTCTATTCCCGCCCAGCAAAGTCCTAAGATCCATGGAGGAGGCCAGGATCTTAATCTGGCTTTTCCCACTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAACAATAGTAATATCCCTTATGTTCCTTCATTCATGATGCCAAATAGCTCGTATGGTAACCTTAATTACCCCTCATCTGGGTTTATTCCCATGCAAGAAGAAACTAAACCTAGCCAGCAGCTGGGATTCTCTGTGGATGGTCTTGGAAATAGATCATATGGCGGAGTACAAGAGAATGATCATAATAATGGCGGGAGACTTTTGCTTCCATTTGGAGGAGTGAAGCAGATTCCAGGAGGTGATCATGAAGTGGAACAAAATAATAAAGAACAAGGGAATTCGAGTGGGTTTTGGACTGGAATGATTGGTGAAGGATCATGCTACGTCTCAATCTCTGCCTGCACTGACGACATCCATCACATGTTAATAGGTGAATTATATATAGACTATATATATGTACGCATATGA 915 0.4295 MEGIPNQNSVTKPVMIEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITNSSPSSSSTSSSSSKVPDLNPPLPSSLSGLKDPTSLNLSRSQMMNQSFPMNCSIPAQQSPKIHGGGQDLNLAFPTSSLSAPRVLNNNSNIPYVPSFMMPNSSYGNLNYPSSGFIPMQEETKPSQQLGFSVDGLGNRSYGGVQENDHNNGGRLLLPFGGVKQIPGGDHEVEQNNKEQGNSSGFWTGMIGEGSCYVSISACTDDIHHMLIGELYIDYIYVRI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0118 304 MobiDBLite consensus disorder prediction 1 24 - -
Lele40g0118 304 MobiDBLite consensus disorder prediction 78 120 - -
Lele40g0118 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 191 IPR045174 GO:0003700|GO:0006355
Lele40g0118 304 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Lele40g0118 304 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Lele40g0118 304 MobiDBLite consensus disorder prediction 67 120 - -
Lele40g0118 304 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0118 Lele-ChrLele40 882920 884425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0118 14 271 C2C2-Dof Transcription Factor Family AT3G61850 41.912 4.00e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele40g0118 zf-Dof 8.1e-33 No_clan