Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0114 ATGGAAGCGAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAGATGTGACCGCAACTGCCTTCTCGCTCCATACTTTCCAGCCGACGAGCTTGACAAGTTCGTTGTTGTTCACAGAGTCTTCGGCGCCAGCAACGTTATTAAAATGATTCAGATGGTGGAGGAGGCGAACAGGGAGGACGCAGTGAAAGCTATAGTGTACGAGGCAATGGCGAGGATGAGGGATCCAGTGTTTGGCAGTGCAGGGGCGATACAGCAGCTGCAGAAGATGGTTCAACAGCTCAAAGTGGAGGTGGAAGCCATGAAAGCTAGGGTTTCAGAGGTGCAAGAACAAAGAGACCAGTTGCTCATGAATCTTGTTCATACCCACCATGATATTGATCCTGTTCCTCATCAGTTTCCCATCAATATTAATGTCCAAGATTCTTTCTTTGATGACTATTACGCTGCTTTTTCTTCAGACCCCATGGAGGATCAGTTTCCTCTGCAAGGCGACTGGGTGTTGTAG 516 0.4942 MEAKPHQPCAACRMLRRRCDRNCLLAPYFPADELDKFVVVHRVFGASNVIKMIQMVEEANREDAVKAIVYEAMARMRDPVFGSAGAIQQLQKMVQQLKVEVEAMKARVSEVQEQRDQLLMNLVHTHHDIDPVPHQFPININVQDSFFDDYYAAFSSDPMEDQFPLQGDWVL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0114 171 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lele40g0114 171 Coils Coil 87 121 - -
Lele40g0114 171 SUPERFAMILY Spectrin repeat 64 127 - -
Lele40g0114 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 117 - -
Lele40g0114 171 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0114 Lele-ChrLele40 823680 824329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0114 8 146 AS2 family AT2G28500 46.043 5.30e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele40g0114 LOB 2.5e-37 No_clan