Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0105 ATGGAATCCGAAACACCGCGGAAAATTGAGGAAATGTTGATGGACATACTGAAGAATTCCAACACTGATGAGGCGACTGAGTTCACAGTCCGACTCGCGGCGAGGAATGTGGAGGTTCATGATTTCAGAGGGAAAGAATTAGTCTCAATCAGGGAATTTTATCAAAAAGATGGAAGACAGCTCCCTTCAGCCAAAGGGATAAGTTTGCCAACTGAACAATGGGCTATCTTCAAGAAAAATGTCCCTGCTATAGAGGAAACTATCACAAAGATGGGAGCAAAGATGCGGTCCGAGGTCCATGGTAACCAAAATGGAGATGTTCTGAACCCAATTGATGGTAAACAAAGTGGAGATGTGCTGAATCCAATTCATGTCAAGCAAAATGGAGATGTGCTGAACCCAGTTCATGGCAAGCAAAATGGAGAAGTGCCGAACCCAGTTCACGGTGAGCAAAATGGAGAAGATGTTTGCATCAAGCTAATGCTTGAAGAGTATCTACCGTTATGGATGTTAATGGAACGTTTGAGGACGGAGGAAGAATCTCGCAATCAAGTCAAACAAGGGGGTGAACCTTCCAGTGGTAACACAAGCTATCATGAGGGGAGAAAATTTGTTCAGAGAGGGAAAGATATGAAGCTTTCAAGCATGTTTGGCCAGAGGAATAGGCCAGACATGAATATCAAGAGAAAAGTGTGTTATGCCTGTGGGAAGAAAGGGCATCTTGCGGCCAAATCGACCACGAAATTCCTTGTAACCATGTTAGGTGGGTTCTACGGAATTGTTTTGATCCGTGAGAAGGTATTTGTTCAACTGGTGCTTTTCTCCAGGGGGCAGGGTCTGATCTGTACATATCAATTTCATTTTTCCCATGATTACTTGTCTTCTGTTGTATGA 894 0.4362 MESETPRKIEEMLMDILKNSNTDEATEFTVRLAARNVEVHDFRGKELVSIREFYQKDGRQLPSAKGISLPTEQWAIFKKNVPAIEETITKMGAKMRSEVHGNQNGDVLNPIDGKQSGDVLNPIHVKQNGDVLNPVHGKQNGEVPNPVHGEQNGEDVCIKLMLEEYLPLWMLMERLRTEEESRNQVKQGGEPSSGNTSYHEGRKFVQRGKDMKLSSMFGQRNRPDMNIKRKVCYACGKKGHLAAKSTTKFLVTMLGGFYGIVLIREKVFVQLVLFSRGQGLICTYQFHFSHDYLSSVV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0105 297 Pfam Transcriptional Coactivator p15 (PC4) 35 80 IPR003173 GO:0003677|GO:0006355
Lele40g0105 297 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 35 92 IPR045125 GO:0003713|GO:0060261
Lele40g0105 297 MobiDBLite consensus disorder prediction 180 201 - -
Lele40g0105 297 SUPERFAMILY ssDNA-binding transcriptional regulator domain 35 90 IPR009044 GO:0003677|GO:0006355
Lele40g0105 297 MobiDBLite consensus disorder prediction 186 200 - -
Lele40g0105 297 Gene3D Transcriptional Coactivator Pc4; Chain A 18 96 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0105 Lele-ChrLele40 750777 753980 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele40g0105 PC4 5.6e-18 CL0609