Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0094 ATGAGGCTTCAGAGCTGGAACAAAATATTACTGATGATATGTGTAATGGCGCTGCTTGTTGATCCAATCTTCTTTTACATCCCCCAGATTGATGCCAACCGAAAATGCCTTGTTTTGGACAAGCCCTTGAAGATTACAACTTGTGCTCTTCGCACTTTCCTTGATCTTTCCTACTTCGTTCTCCATCTCATGCTTCGGTTTCGACCTGATTTTATCGTACCTCATTCTTCGCCTTTTCCACGAATATTTGGTGAGTTCGTTGTTGTTGATTCTGAAGCTGTTGCAAAAAGATCCTTATCCAAATTCATCGTTGATGTCTTCTCAATTATTCCACTTCCCCAGGCGTTTGTCTTATTTGTTCCATTAATAGATAAGGAATATTTAAAGTATATAGTATTAGTCCAGTATGTGCCAAGAATCGTTCGGATGTATCCATTCTTCAGAGAAGTAACCAGAACTGCTGGCAATATACTTACTGACAAAGCATGGGCCGCTGCTGCTTATAATCTCCTTCTCTTTATGCTTGCAAGCCACGTGGTTGGCTCAGTGTGGTACCTACTTTCAGTAGAATCAGAGATTCGATGTTGGAGTCAAGAATTGAAGAATGCTAATCTCTCTGCTGCCACTAAATACTTGAGCTGTAGACACCAGAATTCAACTGTCTTGTCACTTCTCAAAAGTTCTTGCCCCTTGAAAAATCCTGATGAGATTGACGACCCAGCAGCAGTCTTCAATTTCGGAATATTTATCGATGCGCTCAGATCTCGTGTGGTGGAATCAACAACGAATTTCCGTCAGAAGATCTTCTACTGCTTTTGGTGGGGTTTGCGCAATGTGAGTTCTCTGGGGCAAGACCTCAAGACTAGTACATTTATTGAGGAAATACTCTTCACTGTCTTCATTGCCATCTTCGGCTTGATTTTATTCGCGTTGCTCATTGGAAACGTGCAGAGATATCTACAATCCATGCAATCTACAGCAGTTAGAGCTGAAGAAATGAGAGTGAATATACAGAATATAGATAAATGGATGTCCCAGCGTAAGCTACCAGACCACTTGAAGAAAAGAATCAAACGATATCAACATTACAAATGGGAACAACACGAGGGTGTGGATGAGGAAACATTAATCCACAATCTTCCTAAAGACCTGAGAAGGGACATAAAGCGTCACCTTTGCTGGCATTTACTTATGAAAGTTCCAATGTTTGAGAAAATGGACGAGCAGTTGTTGGATGCACTTAGTGATAGGCTGAAGCCAGTACTTTATACAGAGAAGAGCCACATTGTTAGGGAAGGAGATCCAGTGGATCAAATGCTGTTTATTATGAGAGGAAACCTTGCTACAATGACAACAAATGGTGGAAGAACTGGTTTTTTCAACTCTTTCGTGATCAAGGAGGGTGATTTCTGTGGAGAGGAGCTTCTAACATGGGCCTTGGACCCCAACTCATCCTCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAAGCCTTTGCTGTCATGGCTAATGACTTGAAGCTCGTTGCTTCCCAATTTCGACGCCTTCACAACAAACACGTCCAGCACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCCTGTTTCATACAAGTAGCATGGCGTCGCCACTGTAAAAGAAAGATTGAGAAAGCTTTACGTGAAGCAGAAGATAGGCTACAAGATGCTTTGGCAAAGGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATATATGCATCAAGGTTTGCTGCCAATGCGTTACGCAGCCTTCGGAAAAATGGGGACCGAAAAAACAACAGAATGTCTCAGAGATTGCTGCCTCTGCTGCCTCAGAAGCCAACTGAGCCTGATTTCATTACACAATCTTTAGGAGAATCTTAG 1908 0.4224 MRLQSWNKILLMICVMALLVDPIFFYIPQIDANRKCLVLDKPLKITTCALRTFLDLSYFVLHLMLRFRPDFIVPHSSPFPRIFGEFVVVDSEAVAKRSLSKFIVDVFSIIPLPQAFVLFVPLIDKEYLKYIVLVQYVPRIVRMYPFFREVTRTAGNILTDKAWAAAAYNLLLFMLASHVVGSVWYLLSVESEIRCWSQELKNANLSAATKYLSCRHQNSTVLSLLKSSCPLKNPDEIDDPAAVFNFGIFIDALRSRVVESTTNFRQKIFYCFWWGLRNVSSLGQDLKTSTFIEEILFTVFIAIFGLILFALLIGNVQRYLQSMQSTAVRAEEMRVNIQNIDKWMSQRKLPDHLKKRIKRYQHYKWEQHEGVDEETLIHNLPKDLRRDIKRHLCWHLLMKVPMFEKMDEQLLDALSDRLKPVLYTEKSHIVREGDPVDQMLFIMRGNLATMTTNGGRTGFFNSFVIKEGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFAVMANDLKLVASQFRRLHNKHVQHTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKALREAEDRLQDALAKEEGSSVSFGATIYASRFAANALRSLRKNGDRKNNRMSQRLLPLLPQKPTEPDFITQSLGES 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0094 635 MobiDBLite consensus disorder prediction 602 635 - -
Lele40g0094 635 CDD CAP_ED 402 533 IPR000595 -
Lele40g0094 635 Gene3D - 7 320 - -
Lele40g0094 635 SUPERFAMILY Voltage-gated potassium channels 4 322 - -
Lele40g0094 635 SUPERFAMILY cAMP-binding domain-like 331 525 IPR018490 -
Lele40g0094 635 ProSiteProfiles cAMP/cGMP binding motif profile. 402 486 IPR000595 -
Lele40g0094 635 FunFam Cyclic nucleotide-gated ion channel 1 400 518 - -
Lele40g0094 635 Pfam Ion transport protein 4 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele40g0094 635 Gene3D Helix hairpin bin 321 393 - -
Lele40g0094 635 SMART cnmp_10 402 533 IPR000595 -
Lele40g0094 635 Coils Coil 554 574 - -
Lele40g0094 635 Gene3D Jelly Rolls 400 520 IPR014710 -
Lele40g0094 635 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0094 Lele-ChrLele40 695548 698955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0094 3 627 Ion Channels AT5G53130 59.906 0.0 764