Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0092 ATGACAGATTGCCACGTCTCTCTCTCTCTCTCTGTGCAAGATTCTATTCTAAACTCTGCAATTATGGGATTTGAACATCAATCATCAGAATACTCGAACCTCGACCCAGTCTTAGTATCTGAGTTGCAAGACAAGAAAGAAGCAATTTTGTGTTCCTACGCTTCATGGCTAGAAAAGCATCCATCTGGATTGAACAAGTTTGAGGAAATGATGAGCATTGCTAAAGAGAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACTCTCTCTCCCATCGTCGATGACCCCGATCATGCTCATATGACCGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTGTTGTTTTCCTACTGCAATTATCAGTGGAAGGAGTAGAAAAAAGGTATGTGAATTTGTGAGGTTGAGAAATGTGTACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAAAAGGCTCTTCCAAATCAGAAGACCAGAAACATCAGACTAAGGCTGTTGATGAAAAGGGTAATGAAGTAGTTCACTTTCATCCCGCAGAAGAATTCCTGCCAACTATCAAGGAGATAATTCAGGTTCTGAAAGAGAATGTTCTCACAATAAAGGGGTCCAAGATAGAGGACAATATGTTCTGCATCACTGTACACTACAGGCTTGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATCATGGAAGCTTACCCCAATTTTCACATTTCAGGAGGTAGAAAGATTATAGAGATACGCCCAAATATAAATTGGGATAAAGGTTGTGCAGTGCAGTATTTGCTTGGCACCCTTGGCTTTAACAGCTTCGATAACATCATGCCACTCTACATAGGGGATGATACAACTGATGAAGACGCTTTTAAGGTTATAAGAGACATTGGACAAGGTTTTCCGATCATTGTTTCTTCAAAAGCTAAGGAGACCAAAGCTTGTTATTCTCTGCGTGATCCTGATGATGTTTTGTCATTCTTAAAACGTCTTGCTAAGTGGAAGAAAAGCTTGTTATAA 1035 0.4 MTDCHVSLSLSVQDSILNSAIMGFEHQSSEYSNLDPVLVSELQDKKEAILCSYASWLEKHPSGLNKFEEMMSIAKEKEIVVFLDYDGTLSPIVDDPDHAHMTDAMRTAVNEVACCFPTAIISGRSRKKVCEFVRLRNVYYAGSHGMDISTPKGSSKSEDQKHQTKAVDEKGNEVVHFHPAEEFLPTIKEIIQVLKENVLTIKGSKIEDNMFCITVHYRLVKNEKEVGILRKMVESIMEAYPNFHISGGRKIIEIRPNINWDKGCAVQYLLGTLGFNSFDNIMPLYIGDDTTDEDAFKVIRDIGQGFPIIVSSKAKETKACYSLRDPDDVLSFLKRLAKWKKSLL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0092 344 Pfam Trehalose-phosphatase 82 326 IPR003337 GO:0003824|GO:0005992
Lele40g0092 344 TIGRFAM T6PP: trehalose-phosphatase 79 338 IPR003337 GO:0003824|GO:0005992
Lele40g0092 344 CDD HAD_TPP 80 329 - -
Lele40g0092 344 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 46 341 IPR044651 GO:0004805|GO:0005992
Lele40g0092 344 FunFam Trehalose 6-phosphate phosphatase 180 257 - -
Lele40g0092 344 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 81 302 IPR006379 -
Lele40g0092 344 Gene3D - 79 177 IPR023214 -
Lele40g0092 344 Gene3D - 207 343 IPR023214 -
Lele40g0092 344 SUPERFAMILY HAD-like 80 340 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0092 Lele-ChrLele40 676178 681664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0092 75 337 Trehalose Biosynthesis Gene Families AT1G70290 25.000 1.26e-07 51.6