Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0087 ATGGAGGCCCTCAATGCTGCTACCTTGACCCCTTTATCAGTGCTCTGCGATAGAAGAAAACAACCCAGAAGATTCTCATCACTACCCAGAATTTCCGCTAGCAAGGTCTCAGATTCTGCCAGTTTTCCCTACAAGAAAGCATCTCTGAATGGGGATTTACCTGCAGGTTTACGTGGGGGCCTTCTTCTTGCAGCTTCAGTCATCAATGGAGGAATCGCTAAAGCTCTAACATATGAGGAGGCATTGAAGCAATCTGTGGGAAGCCCTACTAGTTCTGGGGATTTTGATGTAAATGGGGTTATAGATAGTGTCATAAGTTTTGGAACAGATAACGCTTTGATTATAGCTGGAGGGTTAGCTATTTTGGGGGTGCCTCTGGTTTTGTCTCAGGTTCTGAACAAGCCTAAGCCATGGGGTGTTGAGTCAGCTAAAAATACATATGCAAAGCTTGGTGCTGATGGGGATGCTCAGTTGCTTGATATAAGAGCACCGACAGAGTTTAGGCAAGTGGGTACTCCAGATGTTGGGGGTTTGAAGAAGAAGGCCGTGTCAATCACTTACAAAGCTGATGATAAACCTGGGTTTCTGAAGAAGCTGGCTTTGAAGTTTAAGGAACCAGAAAATACTACATTGTTCATTCTGGACAAATTTGATGGGAACTCCGAATTGGTTGCAGAGTTTGTTACAGTCAATGGATTCAAAGCTGCTTATGCAATTAAGGATGGGGCAGAAGGACCGCGAGGATGGATGAGTTGTGGTCTTCCATGGACACCACCAAGGAAAGCTTTGAGTTTGGATCTTGGCAATTTGACAGAGTCTATCACTGACGCAATAGGAGAGACTACTGATGGCTTGGCTCTCACTCTTGGGATCGCTGCAGCTACCGGTTTGGGGCTGTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTGTAGGTTCTGCTGCAATTGTTCAGTTTGCAAGCAAGAAGTTTCTATTTGCTGAGGATCGAAAGCAAACCCTGAACCAAGTTGACGAGTTTTTGAATACAAAGGTTGCCCCAAAGGAGCTCGTTGATGAGATAGCGCAAATTGGAAAGGCTCTTCTTCCAACCTCCACCGATAGTAAGGCTCTTCCAGCGCCAACAGAGACAACACCGGAACTTGCACCAGCTGCAAGCACTGTGCAGAAAGCAGAAGAAGCCTCTCCTAATGCAGTCTCTGAGTCCAAAGTAGATGCAGCAGCAGAGCCCGTTCCTGAAGTAAATTCAGTGCCCAAACCTGAAGTTAATGCAGAATCAGTTCCTGGGATCTCAAGACCACTTTCACCATACCCATATTATCCGGATTTCAAGCCACCAACATCTCCCACTCCATCTCAGCCCTAG 1368 0.4591 MEALNAATLTPLSVLCDRRKQPRRFSSLPRISASKVSDSASFPYKKASLNGDLPAGLRGGLLLAASVINGGIAKALTYEEALKQSVGSPTSSGDFDVNGVIDSVISFGTDNALIIAGGLAILGVPLVLSQVLNKPKPWGVESAKNTYAKLGADGDAQLLDIRAPTEFRQVGTPDVGGLKKKAVSITYKADDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAEFVTVNGFKAAYAIKDGAEGPRGWMSCGLPWTPPRKALSLDLGNLTESITDAIGETTDGLALTLGIAAATGLGLLAFTEIETILQLVGSAAIVQFASKKFLFAEDRKQTLNQVDEFLNTKVAPKELVDEIAQIGKALLPTSTDSKALPAPTETTPELAPAASTVQKAEEASPNAVSESKVDAAAEPVPEVNSVPKPEVNAESVPGISRPLSPYPYYPDFKPPTSPTPSQP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0087 455 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 136 267 - -
Lele40g0087 455 MobiDBLite consensus disorder prediction 381 397 - -
Lele40g0087 455 MobiDBLite consensus disorder prediction 366 455 - -
Lele40g0087 455 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 258 IPR036873 -
Lele40g0087 455 MobiDBLite consensus disorder prediction 435 455 - -
Lele40g0087 455 Gene3D - 138 268 IPR036873 -
Lele40g0087 455 ProSiteProfiles Rhodanese domain profile. 152 258 IPR001763 -
Lele40g0087 455 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 455 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0087 Lele-ChrLele40 638929 642888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0087 1 445 Sulfurtransferasese or Rhodanese AT4G01050 56.624 2.97e-156 451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0087 40 638929 642888 Lele40g0087 40 638929 642888 ECH
Lele37g0084 37 682258 686297 Lele40g0087 40 638929 642888 hybridization
Lele38g0088 38 675543 679211 Lele40g0087 40 638929 642888 hybridization