Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0085 ATGGAAGATGTCATGAAGTGGGAACAAGTTAGTCTGATCAAGGAGCTAATCCAAGGGAAGGAGTTTGCGGAGCAGCTCTGTTCCCATCTTTCTTCTTCATCGTCTCTTCACGAGAAGGAGCACTTAGTAGAAAAGATTCTTTCATCCTATGAGAAAGCTATGTCCTTGCTTAATAGGGGAGCTAATGTGGGAGACACTGGCGTCATCAACGGCAAGATGATGATGAATTCTCTCTGTTCGTTGATTGGTGGCAGCCCCAAAAGTGAGGGGTTGGACCGAGATTTTAACCACAAGAAAAGAAAGATTATGCCCAGATGGACAAAGCAAGTGAAGGATTGCCCAGGAACAGGGCTCGAAGGGTCTCAGGATGATGGTTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTAGGATCCAAGTTTCCAAGAGGATATTACAGATGTACCCACAGAAATGTACAAGGTTGTCTGGCTACAAAGCAAGTTCAAAGATCTGATGAAGACCAAACGATTCTTGAGATAACGTACAGAGGAAGACACACATGCACTCAAGCATCTCATGTGAAGAAGAAGGCATTACCATTAAAAAGAAAGATGGCTTTCATGGAAGATACAATGCAGAACCATCAAGATGAACAGAAACCACTGGAACTAATAAACCCAGAAGCGTTTTTAAATGTTGGACCAGAGTTTGAAGTTAAAACAGAGGAATGGGATGCAAAGGAGGAAATTTTCCAACCCTTTTGCTTCACTTCTGCGTTAATAGGATCTGAGAATGAAGACAACCTATTATTCTCCGAGCCCATGATGCAAAACCATCATTTCCTGGAAAGCTTGTCTCCTCCTCCTCCTAAGTTCATCTCACCAGCAACCTCGGAATCAAACATGTTCTGTCTGAATGTGCAGACTTCAGAATCTGATGTCACTGACATAGTTTCAGCTCCAACTTCAGTCACCAATTCGCCAATAGCTGATTTGGATCTCTTAGATTTTGAATCCAATTTCCCTTTCAACGAACTATTTTCCTCATAA 1032 0.4225 MEDVMKWEQVSLIKELIQGKEFAEQLCSHLSSSSSLHEKEHLVEKILSSYEKAMSLLNRGANVGDTGVINGKMMMNSLCSLIGGSPKSEGLDRDFNHKKRKIMPRWTKQVKDCPGTGLEGSQDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDQTILEITYRGRHTCTQASHVKKKALPLKRKMAFMEDTMQNHQDEQKPLELINPEAFLNVGPEFEVKTEEWDAKEEIFQPFCFTSALIGSENEDNLLFSEPMMQNHHFLESLSPPPPKFISPATSESNMFCLNVQTSESDVTDIVSAPTSVTNSPIADLDLLDFESNFPFNELFSS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0085 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 295 IPR044810 GO:0003700
Lele40g0085 343 Gene3D WRKY domain 117 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g0085 343 FunFam WRKY transcription factor 53 108 185 - -
Lele40g0085 343 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0085 343 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0085 343 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0085 343 SUPERFAMILY WRKY DNA-binding domain 122 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0085 Lele-ChrLele40 617947 619842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0085 3 245 WRKY Transcription Factor Family AT4G23810 37.545 3.20e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele40g0085 WRKY 6.7e-27 CL0274